RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27196071 27196071 PRJNA1120060_P_NODE_545922_length_358_cov_1.375439_g528259_i0 PRJNA1120060 545922 358 1.375439 4.92407162 Lineus longissimus 88925 Nemertea other_Eukaryota 44.7 0.0286   NR XP_064621245.1 88925 g528259 i0 36.2 0.486033519553073 58 28 43.6 2 302 147 390 444 XP_064621245.1 protein dispatched homolog 1-like [Lineus longissimus] diamond 174 44.7 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
27438643 27438643 PRJNA1120060_P_NODE_1624923_length_288_cov_1.846512_g1606926_i0 PRJNA1120060 1624923 288 1.846512 5.31795456 root 1 Root_unresolved Root_unresolved 46.2 0.00389   NR XP_064638299.1 88925 g1606926 i0 35.8 1.08333333333333 53 34 55.2 0 287 129 118 170 XP_064638299.1 uncharacterized protein K02A2.6-like [Lineus longissimus] diamond 312 46.2 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
32019125 32019125 PRJNA1120060_P_NODE_3309318_length_226_cov_4.816993_g3291208_i0 PRJNA1120060 3309318 226 4.816993 10.88640418 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.9 0.0117   NR XP_064638299.1 88925 g3291208 i0 36.4 7.30088495575221 55 35 73 0 215 51 118 172 XP_064638299.1 uncharacterized protein K02A2.6-like [Lineus longissimus] diamond 1650 43.9 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;