RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26941690 26941690 PRJNA1120060_P_NODE_1496062_length_293_cov_4.122727_g1478074_i0 PRJNA1120060 1496062 293 4.122727 12.07959011 Actinidia fungus negative-stranded RNA virus 1 3079862 Viruses Viruses 43.9 0.0277   NR WON42279.1 3079862 g1478074 i0 34.2 0.747440273037543 73 41 69.6 3 242 39 2087 2157 WON42279.1 RNA-dependent RNA polymerase [Actinidia fungus negative-stranded RNA virus 1] diamond 219 43.9 1 Viruses   Orthornavirae Negarnaviricota         Actinidia fungus negative-stranded RNA virus 1
27732970 27732970 PRJNA1120060_P_NODE_2752824_length_247_cov_1.718391_g2734740_i0 PRJNA1120060 2752824 247 1.718391 4.24442577 Qingdao RNA virus 4 2979708 Viruses Viruses 76.6 4.53e-14   NR BDR95914.1 2979708 g2734740 i0 47.7 0.789473684210526 65 34 78.9 0 219 25 454 518 BDR95914.1 hypothetical protein [Qingdao RNA virus 4] diamond 195 76.6 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;