RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4071627 4071627 PRJNA1120060_P_NODE_1923144_length_276_cov_1.216749_g1905122_i0 PRJNA1120060 1923144 276 1.216749 3.35822724 Acrasis kona 1008807 Heterolobosea other_Eukaryota 108 3.76e-25   NR KAL0477176.1 1008807 g1905122 i0 60.9 1 92 33 96.7 1 1 267 426 517 KAL0477176.1 ubiquitin-like 1-activating enzyme E1 [Acrasis kona] diamond 276 108 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
4082419 4082419 PRJNA1120060_P_NODE_2766084_length_247_cov_0.890805_g2748000_i0 PRJNA1120060 2766084 247 0.890805 2.20028835 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 147 5.27e-39   NR NP_066508.1 5762 g2748000 i0 86.3 2.91497975708502 80 11 97.2 0 245 6 128 207 NP_066508.1 NADH dehydrogenase subunit 11 [Naegleria gruberi] diamond 720 147 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11732888 11732888 PRJNA1120060_P_NODE_2668390_length_249_cov_1.943182_g2650309_i0 PRJNA1120060 2668390 249 1.943182 4.83852318 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 144 4.8799999999999997e-42   NR YP_007890031.1 5763 g2650309 i0 86.6 1.93975903614458 82 11 98.8 0 248 3 4 85 YP_007890031.1 NADH dehydrogenase subunit 8 [Naegleria fowleri] diamond 483 144 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26626157 26626157 PRJNA1120060_P_NODE_2981861_length_242_cov_0.875740_g2963767_i0 PRJNA1120060 2981861 242 0.87574 2.1192908 Acrasis kona 1008807 Heterolobosea other_Eukaryota 43.5 0.0194   NR KAL0479546.1 1008807 g2963767 i0 28.4 0.91735537190082606 74 48 90.5 2 220 2 339 408 KAL0479546.1 hypothetical protein AKO1_007771 [Acrasis kona] diamond 222 43.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
26752446 26752446 PRJNA1120060_P_NODE_2841801_length_245_cov_1.360465_g2823715_i0 PRJNA1120060 2841801 245 1.360465 3.33313925 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 62 6.09e-9   NR XP_044553742.1 51637 g2823715 i0 46 0.771428571428571 63 34 77.1 0 12 200 18 80 XP_044553742.1 uncharacterized protein C9374_013333 [Naegleria lovaniensis] diamond 189 62 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
26815304 26815304 PRJNA1120060_P_NODE_1475501_length_294_cov_3.923077_g1457514_i0 PRJNA1120060 1475501 294 3.923077 11.53384638 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 168 1.61e-49   NR XP_002683197.1 5762 g1457514 i0 84.7 1 98 15 100 0 1 294 97 194 XP_002683197.1 uncharacterized protein NAEGRDRAFT_29264 [Naegleria gruberi] diamond 294 168 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26848623 26848623 PRJNA1120060_P_NODE_833241_length_316_cov_3.283951_g815328_i0 PRJNA1120060 833241 316 3.283951 10.37728516 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 48.5 8e-4   NR XP_044553742.1 51637 g815328 i0 44.3 0.579113924050633 61 33 57.9 1 82 264 14 73 XP_044553742.1 uncharacterized protein C9374_013333 [Naegleria lovaniensis] diamond 183 48.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
26879687 26879687 PRJNA1120060_P_NODE_2888201_length_244_cov_0.912281_g2870112_i0 PRJNA1120060 2888201 244 0.912281 2.22596564 Acrasis kona 1008807 Heterolobosea other_Eukaryota 45.8 0.00201   NR KAL0486497.1 1008807 g2870112 i0 84.6 0.319672131147541 26 4 32 0 82 5 50 75 KAL0486497.1 nascent polypeptide-associated complex subunit alpha [Acrasis kona] diamond 78 45.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27953287 27953287 PRJNA1120060_P_NODE_2147805_length_267_cov_1.417526_g2129759_i0 PRJNA1120060 2147805 267 1.417526 3.78479442 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 137 3.65e-35   NR XP_002669521.1 5762 g2129759 i0 65.9 1.97752808988764 88 30 98.9 0 2 265 466 553 XP_002669521.1 uncharacterized protein NAEGRDRAFT_82111 [Naegleria gruberi] diamond 528 137 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28553896 28553896 PRJNA1120060_P_NODE_2958827_length_242_cov_2.071006_g2940733_i0 PRJNA1120060 2958827 242 2.071006 5.01183452 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 62 5.86e-9   NR XP_044553742.1 51637 g2940733 i0 45.3 1.77272727272727 75 41 93 0 3 227 6 80 XP_044553742.1 uncharacterized protein C9374_013333 [Naegleria lovaniensis] diamond 429 62 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28616160 28616160 PRJNA1120060_P_NODE_1775867_length_282_cov_1.215311_g1757856_i0 PRJNA1120060 1775867 282 1.215311 3.42717702 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 64.3 1.58e-9   NR XP_044551419.1 51637 g1757856 i0 43.5 1.78723404255319 85 45 89.4 2 278 27 611 693 XP_044551419.1 uncharacterized protein C9374_001759 [Naegleria lovaniensis] diamond 504 64.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28701596 28701596 PRJNA1120060_P_NODE_3316207_length_225_cov_5.486842_g3298096_i0 PRJNA1120060 3316207 225 5.486842 12.3453945 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 4.49e-7   NR XP_044551187.1 51637 g3298096 i0 43.3 7.30666666666667 67 38 89.3 0 217 17 5 71 XP_044551187.1 uncharacterized protein C9374_001527 [Naegleria lovaniensis] diamond 1644 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28710929 28710929 PRJNA1120060_P_NODE_1792607_length_281_cov_1.942308_g1774595_i0 PRJNA1120060 1792607 281 1.942308 5.45788548 Acrasis kona 1008807 Heterolobosea other_Eukaryota 169 1.3799999999999998e-48   NR KAL0490373.1 1008807 g1774595 i0 87.9 0.97153024911032 91 11 97.2 0 279 7 332 422 KAL0490373.1 AP-2 complex subunit mu [Acrasis kona] diamond 273 169 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28774135 28774135 PRJNA1120060_P_NODE_2323827_length_260_cov_2.401070_g2305767_i0 PRJNA1120060 2323827 260 2.40107 6.242782 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 43.9 0.0177   NR XP_044553742.1 51637 g2305767 i0 51.4 0.426923076923077 37 18 42.7 0 5 115 38 74 XP_044553742.1 uncharacterized protein C9374_013333 [Naegleria lovaniensis] diamond 111 43.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28806685 28806685 PRJNA1120060_P_NODE_980828_length_312_cov_2.769874_g962899_i0 PRJNA1120060 980828 312 2.769874 8.64200688 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 90.5 1.42e-19   NR XP_044558627.1 5763 g962899 i0 76.5 0.490384615384615 51 11 48.1 1 150 1 94 144 XP_044558627.1 uncharacterized protein FDP41_007301 [Naegleria fowleri] diamond 153 90.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28995951 28995951 PRJNA1120060_P_NODE_2768868_length_247_cov_0.890805_g2750784_i0 PRJNA1120060 2768868 247 0.890805 2.20028835 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 42 0.0115   NR XP_002669369.1 5762 g2750784 i0 31.6 3.70445344129555 76 52 92.3 0 3 230 2 77 XP_002669369.1 uncharacterized protein NAEGRDRAFT_44874 [Naegleria gruberi] diamond 915 42 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29279399 29279399 PRJNA1120060_P_NODE_2445809_length_256_cov_1.207650_g2427740_i0 PRJNA1120060 2445809 256 1.20765 3.091584 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 75.5 1.17e-13   NR XP_002673794.1 5762 g2427740 i0 57.8 1.0546875 90 27 93.8 2 17 256 251 339 XP_002673794.1 uncharacterized protein NAEGRDRAFT_58883 [Naegleria gruberi] diamond 270 75.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29342642 29342642 PRJNA1120060_P_NODE_2195129_length_265_cov_1.979167_g2177077_i0 PRJNA1120060 2195129 265 1.979167 5.24479255 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 79 9.13e-15   NR XP_002672253.1 5762 g2177077 i0 50 1.0188679245283 90 42 99.6 2 264 1 866 954 XP_002672253.1 uncharacterized protein NAEGRDRAFT_72654 [Naegleria gruberi] diamond 270 79 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29785012 29785012 PRJNA1120060_P_NODE_2929031_length_243_cov_0.917647_g2910938_i0 PRJNA1120060 2929031 243 0.917647 2.22988221 Acrasis kona 1008807 Heterolobosea other_Eukaryota 140 4.76e-37   NR KAL0484471.1 1008807 g2910938 i0 91.1 0.975308641975309 79 7 97.5 0 6 242 351 429 KAL0484471.1 chaperonin subunit delta [Acrasis kona] diamond 237 140 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29974134 29974134 PRJNA1120060_P_NODE_2270931_length_262_cov_2.322751_g2252876_i0 PRJNA1120060 2270931 262 2.322751 6.08560762 Acrasis kona 1008807 Heterolobosea other_Eukaryota 127 2.97e-33   NR KAL0481527.1 1008807 g2252876 i0 71.9 1.01908396946565 89 23 99.6 1 261 1 148 236 KAL0481527.1 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [Acrasis kona] diamond 267 127 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30006229 30006229 PRJNA1120060_P_NODE_2761891_length_247_cov_0.896552_g2743807_i0 PRJNA1120060 2761891 247 0.896552 2.21448344 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 51.6 9.1e-6   NR XP_044551187.1 51637 g2743807 i0 46.6 2.11336032388664 58 31 70.4 0 246 73 20 77 XP_044551187.1 uncharacterized protein C9374_001527 [Naegleria lovaniensis] diamond 522 51.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30131600 30131600 PRJNA1120060_P_NODE_2026772_length_271_cov_5.196970_g2008735_i0 PRJNA1120060 2026772 271 5.19697 14.0837887 Acrasis kona 1008807 Heterolobosea other_Eukaryota 70.5 5.12e-13   NR KAL0483494.1 1008807 g2008735 i0 41.5 7.64944649446494 53 31 58.7 0 192 34 62 114 KAL0483494.1 E3 ubiquitin-protein ligase [Acrasis kona] diamond 2073 70.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30322467 30322467 PRJNA1120060_P_NODE_2602412_length_251_cov_0.876404_g2584335_i0 PRJNA1120060 2602412 251 0.876404 2.19977404 Acrasis kona 1008807 Heterolobosea other_Eukaryota 144 1.2899999999999999e-38   NR KAL0476671.1 1008807 g2584335 i0 84 0.968127490039841 81 13 96.8 0 5 247 327 407 KAL0476671.1 hypothetical protein AKO1_006137 [Acrasis kona] diamond 243 144 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30637848 30637848 PRJNA1120060_P_NODE_2818353_length_245_cov_4.418605_g2800267_i0 PRJNA1120060 2818353 245 4.418605 10.82558225 Acrasis kona 1008807 Heterolobosea other_Eukaryota 53.1 8.14e-6   NR KAL0479498.1 1008807 g2800267 i0 34.6 0.991836734693878 81 41 99.2 1 1 243 296 364 KAL0479498.1 DEAD box RNA helicase [Acrasis kona] diamond 243 53.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30701252 30701252 PRJNA1120060_P_NODE_2979814_length_242_cov_0.911243_g2961720_i0 PRJNA1120060 2979814 242 0.911243 2.20520806 Acrasis kona 1008807 Heterolobosea other_Eukaryota 118 7.43e-30   NR KAL0486186.1 1008807 g2961720 i0 70.5 0.966942148760331 78 23 96.7 0 1 234 162 239 KAL0486186.1 NAD-dependent protein deacylase sirtuin [Acrasis kona] diamond 234 118 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30763762 30763762 PRJNA1120060_P_NODE_1802054_length_281_cov_1.028846_g1784042_i0 PRJNA1120060 1802054 281 1.028846 2.89105726 Acrasis kona 1008807 Heterolobosea other_Eukaryota 126 9.809999999999999e-32   NR KAL0477594.1 1008807 g1784042 i0 77 0.928825622775801 87 20 92.9 0 261 1 1 87 KAL0477594.1 transcription initiation factor TFIID subunit 6 [Acrasis kona] diamond 261 126 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31270729 31270729 PRJNA1120060_P_NODE_865515_length_313_cov_3.437500_g847591_i0 PRJNA1120060 865515 313 3.4375 10.759375 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 43.1 0.00799   NR XP_002669369.1 5762 g847591 i0 42.9 0.862619808306709 49 28 47 0 173 27 29 77 XP_002669369.1 uncharacterized protein NAEGRDRAFT_44874 [Naegleria gruberi] diamond 270 43.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31671059 31671059 PRJNA1120060_P_NODE_2757057_length_247_cov_1.436782_g2738973_i0 PRJNA1120060 2757057 247 1.436782 3.54885154 root 1 Root_unresolved Root_unresolved 85.5 3.64e-17   NR XP_044543213.1 51637 g2738973 i0 58.4 10.4574898785425 77 31 93.5 1 13 243 76 151 XP_044543213.1 uncharacterized protein C9374_011118 [Naegleria lovaniensis] diamond 2583 86.3 0.990730011587486 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
31744223 31744223 PRJNA1120060_P_NODE_2726217_length_248_cov_0.885714_g2708134_i0 PRJNA1120060 2726217 248 0.885714 2.19657072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 83.6 1.43e-16   NR XP_002672911.1 5762 g2708134 i0 56 0.907258064516129 75 29 90.7 2 234 10 295 365 XP_002672911.1 uncharacterized protein NAEGRDRAFT_72041 [Naegleria gruberi] diamond 225 83.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32092836 32092836 PRJNA1120060_P_NODE_3605518_length_198_cov_6.224000_g3587390_i0 PRJNA1120060 3605518 198 6.224 12.32352 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 42 0.0381   NR XP_002671877.1 5762 g3587390 i0 32.1 0.848484848484849 56 37 83.3 1 1 165 226 281 XP_002671877.1 uncharacterized protein NAEGRDRAFT_81398 [Naegleria gruberi] diamond 168 42 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32145558 32145558 PRJNA1120060_P_NODE_1087318_length_311_cov_3.268908_g1069383_i0 PRJNA1120060 1087318 311 3.268908 10.16630388 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 7.16e-6   NR XP_002681690.1 5762 g1069383 i0 61 44.6237942122186 41 16 39.5 0 310 188 131 171 XP_002681690.1 dynamin [Naegleria gruberi] diamond 13878 54.7 0.992687385740402 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32440633 32440633 PRJNA1120060_P_NODE_2646539_length_250_cov_0.875706_g2628459_i0 PRJNA1120060 2646539 250 0.875706 2.189265 Acrasis kona 1008807 Heterolobosea other_Eukaryota 164 8.96e-50   NR KAL0479391.1 1008807 g2628459 i0 91.6 0.996 83 7 99.6 0 249 1 38 120 KAL0479391.1 NEDD8-conjugating protein Ubc1 [Acrasis kona] diamond 249 164 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32692395 32692395 PRJNA1120060_P_NODE_2073560_length_270_cov_1.197970_g2055523_i0 PRJNA1120060 2073560 270 1.19797 3.234519 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 154 2.5e-41   NR XP_002676894.1 5762 g2055523 i0 80 1 90 18 100 0 1 270 817 906 XP_002676894.1 rasGEF domain-containing protein [Naegleria gruberi] diamond 270 154 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;