RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Kueneniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kueneniibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27857831 27857831 PRJNA1120060_P_NODE_127765_length_531_cov_1.810044_g112402_i0 PRJNA1120060 127765 531 1.810044 9.61133364 Candidatus Kuenenbacteria bacterium GW2 2699743 Bacteria Bacteria 42.7 0.0375   NR KKS39393.1 1618677 g112402 i0 42.9 0.27683615819209 49 28 27.7 0 34 180 11 59 KKS39393.1 MAG: Ribonuclease H [Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15] diamond 147 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15
28869589 28869589 PRJNA1120060_P_NODE_3224408_length_230_cov_3.414013_g3206301_i0 PRJNA1120060 3224408 230 3.414013 7.8522299 Candidatus Kuenenbacteria bacterium GW2 2699743 Bacteria Bacteria 40 0.0419   NR KKS39393.1 1618677 g3206301 i0 51.4 0.482608695652174 37 18 48.3 0 187 77 18 54 KKS39393.1 MAG: Ribonuclease H [Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15] diamond 111 40 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15
29816536 29816536 PRJNA1120060_P_NODE_2997511_length_241_cov_2.488095_g2979414_i0 PRJNA1120060 2997511 241 2.488095 5.99630895 Candidatus Kuenenbacteria bacterium GW2 2699743 Bacteria Bacteria 40.4 0.0338   NR KKS39393.1 1618677 g2979414 i0 42.9 0.609958506224066 49 28 61 0 71 217 11 59 KKS39393.1 MAG: Ribonuclease H [Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15] diamond 147 40.4 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15
30880652 30880652 PRJNA1120060_P_NODE_2558594_length_252_cov_1.474860_g2540519_i0 PRJNA1120060 2558594 252 1.47486 3.7166472 Bacteria 2 Bacteria Bacteria 48.5 2.51e-5   NR KKS39393.1 1618677 g2540519 i0 52.3 1.57142857142857 44 21 52.4 0 235 104 9 52 KKS39393.1 MAG: Ribonuclease H [Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15] diamond 396 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;