RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27069452 27069452 PRJNA1120060_P_NODE_3185442_length_232_cov_2.710692_g3167336_i0 PRJNA1120060 3185442 232 2.710692 6.28880544 Candidatus Falkowbacteria bacterium CG1 2053554 Bacteria Bacteria 40.8 0.0267   NR PIR94994.1 1974563 g3167336 i0 37.8 0.581896551724138 45 28 58.2 0 180 46 17 61 PIR94994.1 MAG: hypothetical protein COT95_01135 [Candidatus Falkowbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_37_6] diamond 135 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_37_6
29048824 29048824 PRJNA1120060_P_NODE_2212008_length_264_cov_3.382199_g2193955_i0 PRJNA1120060 2212008 264 3.382199 8.92900536 Bacillati 1783272 Bacteria Bacteria 44.3 0.00563   NR OGF25535.1 1797996 g2193955 i0 46.3 3.89772727272727 54 29 61.4 0 52 213 42 95 OGF25535.1 MAG: hypothetical protein A2331_01565 [Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_34_18] diamond 1029 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_34_18
29627024 29627024 PRJNA1120060_P_NODE_344110_length_404_cov_4.024169_g326849_i0 PRJNA1120060 344110 404 4.024169 16.25764276 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 71.6 6.58e-13   NR MCX6795240.1 2053554 g326849 i0 36.3 0.839108910891089 113 72 83.9 0 19 357 21 133 MCX6795240.1 ribonuclease HI family protein [Candidatus Falkowbacteria bacterium] diamond 339 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;