RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6631975 6631975 PRJNA1120060_P_NODE_2641766_length_250_cov_0.881356_g2623686_i0 PRJNA1120060 2641766 250 0.881356 2.20339 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 103 2.38e-24   NR HSQ00825.1 2052315 g2623686 i0 84.6 0.624 52 8 62.4 0 156 1 6 57 HSQ00825.1 agmatine deiminase family protein [Candidatus Dormiibacterota bacterium] diamond 156 103 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
11734943 11734943 PRJNA1120060_P_NODE_2844950_length_245_cov_0.906977_g2826864_i0 PRJNA1120060 2844950 245 0.906977 2.22209365 Candidatus Nephthysia bennettiae 3127016 Bacteria Bacteria 124 2.9999999999999998e-33   NR WP_338200654.1 3127016 g2826864 i0 86.4 0.808163265306122 66 9 80.8 0 241 44 171 236 WP_338200654.1 transaldolase [Candidatus Nephthysia bennettiae] diamond 198 124 1 Bacteria   Bacillati Candidatus Dormiibacterota Candidatus Dormibacteria Candidatus Dormibacterales Candidatus Dormibacteraceae Candidatus Nephthysia Candidatus Nephthysia bennettiae
27763337 27763337 PRJNA1120060_P_NODE_1037144_length_311_cov_6.252101_g1019209_i0 PRJNA1120060 1037144 311 6.252101 19.44403411 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 88.2 9.26e-18   NR HLQ98099.1 2052315 g1019209 i0 93.9 0.472668810289389 49 3 47.3 0 2 148 464 512 HLQ98099.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 147 88.2 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28047797 28047797 PRJNA1120060_P_NODE_193765_length_472_cov_4.862155_g177365_i0 PRJNA1120060 193765 472 4.862155 22.9493716 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 46.2 0.0208   NR MBV8194545.1 2052315 g177365 i0 32.1 0.514830508474576 81 36 50.8 3 232 471 150 212 MBV8194545.1 ABC transporter substrate-binding protein [Candidatus Dormiibacterota bacterium] diamond 243 46.2 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28079469 28079469 PRJNA1120060_P_NODE_2185345_length_265_cov_3.489583_g2167293_i0 PRJNA1120060 2185345 265 3.489583 9.24739495 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 46.2 0.00279   NR HZV48845.1 2052315 g2167293 i0 35.6 0.984905660377358 87 49 96.2 4 6 260 318 399 HZV48845.1 helix-turn-helix domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 261 46.2 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28742755 28742755 PRJNA1120060_P_NODE_2333987_length_260_cov_1.352941_g2315927_i0 PRJNA1120060 2333987 260 1.352941 3.5176466 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 106 5.3699999999999995e-25   NR HLQ97775.1 2052315 g2315927 i0 90.9 0.634615384615385 55 5 63.5 0 94 258 249 303 HLQ97775.1 DUF3991 and TOPRIM domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 165 106 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29500640 29500640 PRJNA1120060_P_NODE_2695130_length_248_cov_4.148571_g2677047_i0 PRJNA1120060 2695130 248 4.148571 10.28845608 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42.7 0.0235   NR HSP98635.1 2052315 g2677047 i0 39.2 0.616935483870968 51 31 61.7 0 24 176 51 101 HSP98635.1 acyltransferase [Candidatus Dormiibacterota bacterium] diamond 153 42.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29743108 29743108 PRJNA1120060_P_NODE_2559390_length_252_cov_1.441341_g2541315_i0 PRJNA1120060 2559390 252 1.441341 3.63217932 Bacillati 1783272 Bacteria Bacteria 101 3.89e-25   NR MDQ6898499.1 2052315 g2541315 i0 58.7 7.79761904761905 75 30 88.1 1 4 225 44 118 MDQ6898499.1 SRPBCC domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 1965 102 0.990196078431373 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29942206 29942206 PRJNA1120060_P_NODE_1524831_length_292_cov_2.534247_g1506842_i0 PRJNA1120060 1524831 292 2.534247 7.40000124 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42.7 0.0234   NR HEY3084679.1 2052315 g1506842 i0 42.2 0.462328767123288 45 26 46.2 0 152 18 43 87 HEY3084679.1 transcriptional repressor [Candidatus Dormiibacterota bacterium] diamond 135 42.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30795816 30795816 PRJNA1120060_P_NODE_2728134_length_248_cov_0.880000_g2710051_i0 PRJNA1120060 2728134 248 0.88 2.1824 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 99.8 2.1e-24   NR HLQ98107.1 2052315 g2710051 i0 60.5 1.95967741935484 81 31 98 1 245 3 67 146 HLQ98107.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 486 99.8 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32408726 32408726 PRJNA1120060_P_NODE_258659_length_436_cov_5.280992_g241784_i0 PRJNA1120060 258659 436 5.280992 23.02512512 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 145 1.72e-39   NR HLQ98109.1 2052315 g241784 i0 64.5 0.853211009174312 124 42 83.9 1 383 18 209 332 HLQ98109.1 replication initiator protein A [Candidatus Dormiibacterota bacterium] diamond 372 145 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;