RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_kingdom = "Promethearchaeati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 34 ✖

bioproject 1

  • PRJNA1120060 · 34 ✖

analysis 1

  • diamond · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26626184 26626184 PRJNA1120060_P_NODE_3024961_length_239_cov_5.463855_g3006861_i0 PRJNA1120060 3024961 239 5.463855 13.05861345 Promethearchaeota archaeon 2053489 Archaea Archaea 43.9 0.0137   NR MBN2151993.1 2053489 g3006861 i0 34.2 0.916317991631799 73 40 91.6 2 235 17 166 230 MBN2151993.1 B12-binding domain-containing radical SAM protein [Promethearchaeota archaeon] diamond 219 43.9 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
27227371 27227371 PRJNA1120060_P_NODE_3027263_length_239_cov_4.439759_g3009163_i0 PRJNA1120060 3027263 239 4.439759 10.61102401 Promethearchaeati archaeon 2591838 Archaea Archaea 43.1 0.018   NR NHJ87358.1 2591838 g3009163 i0 29.6 0.891213389121339 71 43 89.1 1 218 6 101 164 NHJ87358.1 RNA 2',3'-cyclic phosphodiesterase [Promethearchaeati archaeon] diamond 213 43.1 1 Archaea   Promethearchaeati           Promethearchaeati archaeon
27354023 27354023 PRJNA1120060_P_NODE_2865743_length_244_cov_3.122807_g2847654_i0 PRJNA1120060 2865743 244 3.122807 7.61964908 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 42.7 0.0366   NR MDD1777485.1 2719382 g2847654 i0 34 0.577868852459016 47 31 57.8 0 41 181 270 316 MDD1777485.1 hypothetical protein [Candidatus Helarchaeota archaeon] diamond 141 42.7 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon
27470217 27470217 PRJNA1120060_P_NODE_3241643_length_229_cov_4.608974_g3223536_i0 PRJNA1120060 3241643 229 4.608974 10.55455046 root 1 Root_unresolved Root_unresolved 60.8 1.23e-8   NR MBN2228639.1 2053491 g3223536 i0 42.5 6.6943231441048 73 42 95.6 0 9 227 319 391 MBN2228639.1 DDE-type integrase/transposase/recombinase [Candidatus Thorarchaeota archaeon] diamond 1533 60.8 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
27638575 27638575 PRJNA1120060_P_NODE_3587144_length_200_cov_4.125984_g3569017_i0 PRJNA1120060 3587144 200 4.125984 8.251968 Promethearchaeia archaeon 3067280 Archaea Archaea 62.4 2.48e-9   NR MFO7795213.1 3067280 g3569017 i0 72.1 0.645 43 12 64.5 0 3 131 893 935 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 129 62.4 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
28017111 28017111 PRJNA1120060_P_NODE_2978485_length_242_cov_0.917160_g2960391_i0 PRJNA1120060 2978485 242 0.91716 2.2195272 Promethearchaeota archaeon 2053489 Archaea Archaea 42.4 0.0481   NR TXT55076.1 2053489 g2960391 i0 36.8 0.706611570247934 57 33 70.7 1 27 197 161 214 TXT55076.1 MAG: hypothetical protein BAJALOKI2v1_690013 [Promethearchaeota archaeon] diamond 171 42.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
28300161 28300161 PRJNA1120060_P_NODE_1642986_length_287_cov_2.780374_g1624988_i0 PRJNA1120060 1642986 287 2.780374 7.97967338 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 43.5 0.0328   NR NVM03054.1 2719382 g1624988 i0 38.2 0.574912891986063 55 34 57.5 0 178 14 155 209 NVM03054.1 hypothetical protein [Candidatus Helarchaeota archaeon] diamond 165 43.5 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon
28363484 28363484 PRJNA1120060_P_NODE_2009526_length_272_cov_2.713568_g1991493_i0 PRJNA1120060 2009526 272 2.713568 7.38090496 Candidatus Asgardarchaeum californiense 3067292 Archaea Archaea 44.7 0.00459   NR RLI59615.1 3067292 g1991493 i0 35.8 0.738970588235294 67 43 73.9 0 5 205 77 143 RLI59615.1 MAG: ribonuclease H [Candidatus Asgardarchaeum californiense] diamond 201 44.7 1 Archaea   Promethearchaeati   Candidatus Asgardarchaeia (ex Tamarit et al. 2024) Candidatus Asgardarchaeales (ex Tamarit et al. 2024) Candidatus Asgardarchaeaceae Candidatus Asgardarchaeum (ex Tamarit et al. 2024) Candidatus Asgardarchaeum californiense
28742471 28742471 PRJNA1120060_P_NODE_1924807_length_276_cov_1.054187_g1906785_i0 PRJNA1120060 1924807 276 1.054187 2.90955612 Candidatus Hodarchaeales archaeon 3069329 Archaea Archaea 47.8 5.74e-4   NR HKZ43206.1 3069329 g1906785 i0 34.1 0.891304347826087 82 52 89.1 1 249 4 41 120 HKZ43206.1 hypothetical protein [Candidatus Hodarchaeales archaeon] diamond 246 47.8 1 Archaea   Promethearchaeati Candidatus Hodarchaeota Candidatus Hodarchaeia Candidatus Hodarchaeales     Candidatus Hodarchaeales archaeon
29143842 29143842 PRJNA1120060_P_NODE_556669_length_356_cov_1.756184_g538991_i0 PRJNA1120060 556669 356 1.756184 6.25201504 Archaea 2157 Archaea Archaea 43.5 0.0311   NR KXH77019.1 1706445 g538991 i0 36.4 0.741573033707865 44 28 37.1 0 139 8 97 140 KXH77019.1 MAG: hypothetical protein AM324_04455 [Candidatus Thorarchaeota archaeon SMTZ1-83] diamond 264 43.9 0.990888382687927 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon SMTZ1-83
29594355 29594355 PRJNA1120060_P_NODE_1603910_length_289_cov_1.425926_g1585917_i0 PRJNA1120060 1603910 289 1.425926 4.12092614 Promethearchaeia archaeon 3067280 Archaea Archaea 43.1 0.0408   NR HME52843.1 3067280 g1585917 i0 47.4 0.394463667820069 38 20 39.4 0 137 250 157 194 HME52843.1 DNA methyltransferase [Promethearchaeia archaeon] diamond 114 43.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
29911370 29911370 PRJNA1120060_P_NODE_2637091_length_250_cov_1.316384_g2619011_i0 PRJNA1120060 2637091 250 1.316384 3.29096 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 45.1 0.00629   NR RDE15976.1 2053491 g2619011 i0 32.3 0.744 62 33 70.8 2 1 177 255 310 RDE15976.1 MAG: methionine--tRNA ligase [Candidatus Thorarchaeota archaeon] diamond 186 45.1 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
29932999 29932999 PRJNA1120060_P_NODE_2146471_length_267_cov_1.536082_g2128425_i0 PRJNA1120060 2146471 267 1.536082 4.10133894 Archaea 2157 Archaea Archaea 43.9 0.0181   NR NVM43513.1 2053489 g2128425 i0 36.2 1.30337078651685 58 37 65.2 0 92 265 78 135 NVM43513.1 helix-turn-helix domain-containing protein [Promethearchaeota archaeon] diamond 348 43.9 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
29973864 29973864 PRJNA1120060_P_NODE_1855971_length_278_cov_3.800000_g1837955_i0 PRJNA1120060 1855971 278 3.8 10.564 Candidatus Heimdallarchaeota archaeon LC_3 1841598 Archaea Archaea 43.1 0.0407   NR OLS26976.1 1841598 g1837955 i0 29 0.669064748201439 62 44 66.9 0 52 237 22 83 OLS26976.1 MAG: hypothetical protein HeimC3_06350 [Candidatus Heimdallarchaeota archaeon LC_3] diamond 186 43.1 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_3
30195478 30195478 PRJNA1120060_P_NODE_2809112_length_246_cov_0.895954_g2791026_i0 PRJNA1120060 2809112 246 0.895954 2.20404684 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 42.7 0.0397   NR MCF2136888.1 2053491 g2791026 i0 35.3 1.26829268292683 51 31 62.2 1 82 234 266 314 MCF2136888.1 methionine--tRNA ligase [Candidatus Thorarchaeota archaeon] diamond 312 42.7 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30416486 30416486 PRJNA1120060_P_NODE_1820533_length_280_cov_1.483092_g1802519_i0 PRJNA1120060 1820533 280 1.483092 4.1526576 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 43.5 0.0303   NR RDE15976.1 2053491 g1802519 i0 32.7 0.557142857142857 52 29 55.7 1 161 6 261 306 RDE15976.1 MAG: methionine--tRNA ligase [Candidatus Thorarchaeota archaeon] diamond 156 43.5 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30510510 30510510 PRJNA1120060_P_NODE_1236893_length_309_cov_5.122881_g1218952_i0 PRJNA1120060 1236893 309 5.122881 15.82970229 Promethearchaeota archaeon 2053489 Archaea Archaea 43.9 0.0298   NR MCK5587475.1 2053489 g1218952 i0 43.2 0.427184466019417 44 25 42.7 0 48 179 289 332 MCK5587475.1 formylmethanofuran dehydrogenase subunit B [Promethearchaeota archaeon] diamond 132 43.9 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30668668 30668668 PRJNA1120060_P_NODE_1519653_length_292_cov_3.452055_g1501664_i0 PRJNA1120060 1519653 292 3.452055 10.0800006 Promethearchaeia archaeon 3067280 Archaea Archaea 140 2.26e-36   NR MFO7795213.1 3067280 g1501664 i0 70.4 1.00684931506849 98 27 98.6 1 290 3 158 255 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 294 140 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
30764983 30764983 PRJNA1120060_P_NODE_623674_length_345_cov_1.036765_g605922_i0 PRJNA1120060 623674 345 1.036765 3.57683925 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 132 2.41e-35   NR TFH07296.1 2053491 g605922 i0 58.2 0.956521739130435 110 46 95.7 0 13 342 23 132 TFH07296.1 MAG: hypothetical protein E4H14_08835 [Candidatus Thorarchaeota archaeon] diamond 330 132 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30795760 30795760 PRJNA1120060_P_NODE_2635734_length_250_cov_1.389831_g2617654_i0 PRJNA1120060 2635734 250 1.389831 3.4745775 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 43.5 0.0214   NR MCG3218000.1 2026747 g2617654 i0 39.2 0.612 51 31 61.2 0 11 163 319 369 MCG3218000.1 hypothetical protein [Candidatus Heimdallarchaeota archaeon] diamond 153 43.5 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
30826757 30826757 PRJNA1120060_P_NODE_1704894_length_285_cov_1.155660_g1686890_i0 PRJNA1120060 1704894 285 1.15566 3.293631 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 48.5 5.61e-4   NR TFG13247.1 2053491 g1686890 i0 33.3 1.2 57 32 60 1 275 105 260 310 TFG13247.1 MAG: methionine--tRNA ligase [Candidatus Thorarchaeota archaeon] diamond 342 48.5 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30890157 30890157 PRJNA1120060_P_NODE_1802614_length_281_cov_0.889423_g1784602_i0 PRJNA1120060 1802614 281 0.889423 2.49927863 Promethearchaeota archaeon 2053489 Archaea Archaea 43.1 0.0424   NR TES99012.1 2053489 g1784602 i0 40.4 0.608540925266904 57 34 60.9 0 62 232 382 438 TES99012.1 MAG: hypothetical protein E3J90_05275 [Promethearchaeota archaeon] diamond 171 43.1 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31259910 31259910 PRJNA1120060_P_NODE_2294875_length_261_cov_2.712766_g2276816_i0 PRJNA1120060 2294875 261 2.712766 7.08031926 root 1 Root_unresolved Root_unresolved 42.7 0.0461   NR MFQ6126421.1 2026747 g2276816 i0 32.3 1.44827586206897 65 44 74.7 0 231 37 119 183 MFQ6126421.1 dihydroorotase family protein [Candidatus Heimdallarchaeota archaeon] diamond 378 42.7 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
31269420 31269420 PRJNA1120060_P_NODE_1942235_length_275_cov_1.732673_g1924211_i0 PRJNA1120060 1942235 275 1.732673 4.76485075 Promethearchaeota archaeon 2053489 Archaea Archaea 41.2 0.0363   NR TFF85692.1 2053489 g1924211 i0 46.2 0.425454545454545 39 20 42.5 1 133 249 38 75 TFF85692.1 MAG: hypothetical protein EU551_03495 [Promethearchaeota archaeon] diamond 117 41.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31364800 31364800 PRJNA1120060_P_NODE_2519716_length_253_cov_2.088889_g2501644_i0 PRJNA1120060 2519716 253 2.088889 5.28488917 Promethearchaeia archaeon 3067280 Archaea Archaea 87.8 5.74e-18   NR MFO7795213.1 3067280 g2501644 i0 76.9 0.616600790513834 52 12 61.7 0 96 251 478 529 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 156 87.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
31554848 31554848 PRJNA1120060_P_NODE_2783536_length_246_cov_2.919075_g2765450_i0 PRJNA1120060 2783536 246 2.919075 7.1809245 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 42.4 0.0316   NR MFQ5819116.1 2026747 g2765450 i0 31.9 0.878048780487805 72 45 84.1 2 222 16 22 92 MFQ5819116.1 ribosomal protein S18-alanine N-acetyltransferase [Candidatus Heimdallarchaeota archaeon] diamond 216 42.4 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
31618486 31618486 PRJNA1120060_P_NODE_700956_length_333_cov_3.300000_g683129_i0 PRJNA1120060 700956 333 3.3 10.989 Promethearchaeota archaeon 2053489 Archaea Archaea 43.9 0.0402   NR TFG03779.1 2053489 g683129 i0 34.9 0.774774774774775 86 50 73 3 18 260 349 433 TFG03779.1 MAG: phosphate ABC transporter permease subunit PstC [Promethearchaeota archaeon] diamond 258 43.9 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31965145 31965145 PRJNA1120060_P_NODE_1957958_length_274_cov_3.074627_g1939932_i0 PRJNA1120060 1957958 274 3.074627 8.42447798 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 43.1 0.041   NR RDE13712.1 2053491 g1939932 i0 45.3 0.58029197080292 53 27 56.9 2 34 189 451 502 RDE13712.1 MAG: isoleucine--tRNA ligase [Candidatus Thorarchaeota archaeon] diamond 159 43.1 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
31987283 31987283 PRJNA1120060_P_NODE_2083998_length_269_cov_2.928571_g2065958_i0 PRJNA1120060 2083998 269 2.928571 7.87785599 root 1 Root_unresolved Root_unresolved 59.3 1.22e-8   NR OLS24163.1 1841598 g2065958 i0 36.6 2.96654275092937 93 51 95.9 3 3 260 11 102 OLS24163.1 MAG: Ribonuclease HI [Candidatus Heimdallarchaeota archaeon LC_3] diamond 798 59.3 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_3
32029492 32029492 PRJNA1120060_P_NODE_3206958_length_231_cov_2.772152_g3188851_i0 PRJNA1120060 3206958 231 2.772152 6.40367112 Promethearchaeota archaeon 2053489 Archaea Archaea 42.4 0.0428   NR TFG00604.1 2053489 g3188851 i0 38.1 0.545454545454545 42 26 54.5 0 192 67 144 185 TFG00604.1 MAG: hypothetical protein EU542_07925, partial [Promethearchaeota archaeon] diamond 126 42.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
32091523 32091523 PRJNA1120060_P_NODE_1449118_length_296_cov_1.000000_g1431134_i0 PRJNA1120060 1449118 296 1 2.96 Promethearchaeia archaeon 3067280 Archaea Archaea 43.9 0.0265   NR MFO8018910.1 3067280 g1431134 i0 28.8 0.810810810810811 80 57 81.1 0 26 265 168 247 MFO8018910.1 CoA-binding protein [Promethearchaeia archaeon] diamond 240 43.9 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32251430 32251430 PRJNA1120060_P_NODE_403518_length_388_cov_2.282540_g386096_i0 PRJNA1120060 403518 388 2.28254 8.8562552 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 44.3 0.0473   NR NHI89277.1 2053491 g386096 i0 37.1 0.479381443298969 62 34 44.1 1 4 174 228 289 NHI89277.1 tRNA (guanine(10)-N(2))-dimethyltransferase [Candidatus Thorarchaeota archaeon] diamond 186 44.3 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
32503719 32503719 PRJNA1120060_P_NODE_2426319_length_256_cov_3.562842_g2408250_i0 PRJNA1120060 2426319 256 3.562842 9.12087552 Candidatus Heimdallarchaeota archaeon AB_125 1841596 Archaea Archaea 43.5 0.0234   NR OLS31033.1 1841596 g2408250 i0 36.4 0.64453125 55 33 62.1 1 71 229 286 340 OLS31033.1 MAG: Sulfate transport system permease protein CysW [Candidatus Heimdallarchaeota archaeon AB_125] diamond 165 43.5 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon AB_125
32818386 32818386 PRJNA1120060_P_NODE_2085720_length_269_cov_2.642857_g2067680_i0 PRJNA1120060 2085720 269 2.642857 7.10928533 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 75.5 1.51e-13   NR MBN2228639.1 2053491 g2067680 i0 42 1.80669144981413 81 47 90.3 0 3 245 202 282 MBN2228639.1 DDE-type integrase/transposase/recombinase [Candidatus Thorarchaeota archaeon] diamond 486 75.5 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;