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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA1120060 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
269201 269201 PRJNA1120060_P_NODE_636041_length_343_cov_1.225926_g618279_i0 PRJNA1120060 636041 343 1.225926 4.20492618 Taiwan douglas-fir deltapartitivirus 2933092 Viruses Viruses 67 3.51e-10   NR CAI5384001.1 2933092 g618279 i0 61.1 0.472303206997085 54 18 47.2 1 178 17 128 178 CAI5384001.1 RNA-dependent RNA polymerase [Taiwan douglas-fir deltapartitivirus] diamond 162 67 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Deltapartitivirus Taiwan douglas-fir deltapartitivirus
26941690 26941690 PRJNA1120060_P_NODE_1496062_length_293_cov_4.122727_g1478074_i0 PRJNA1120060 1496062 293 4.122727 12.07959011 Actinidia fungus negative-stranded RNA virus 1 3079862 Viruses Viruses 43.9 0.0277   NR WON42279.1 3079862 g1478074 i0 34.2 0.747440273037543 73 41 69.6 3 242 39 2087 2157 WON42279.1 RNA-dependent RNA polymerase [Actinidia fungus negative-stranded RNA virus 1] diamond 219 43.9 1 Viruses   Orthornavirae Negarnaviricota         Actinidia fungus negative-stranded RNA virus 1
27447678 27447678 PRJNA1120060_P_NODE_1261443_length_309_cov_2.084746_g1243502_i0 PRJNA1120060 1261443 309 2.084746 6.44186514 Pinus albicaulis amalgavirus 1 2982067 Viruses Viruses 56.6 1.13e-6   NR DAZ91039.1 2982067 g1243502 i0 37.8 0.796116504854369 82 37 66 1 103 306 868 949 DAZ91039.1 TPA_asm: fusion protein [Pinus albicaulis amalgavirus 1] diamond 246 56.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Amalgaviridae Amalgavirus Pinus albicaulis amalgavirus 1
27732970 27732970 PRJNA1120060_P_NODE_2752824_length_247_cov_1.718391_g2734740_i0 PRJNA1120060 2752824 247 1.718391 4.24442577 Qingdao RNA virus 4 2979708 Viruses Viruses 76.6 4.53e-14   NR BDR95914.1 2979708 g2734740 i0 47.7 0.789473684210526 65 34 78.9 0 219 25 454 518 BDR95914.1 hypothetical protein [Qingdao RNA virus 4] diamond 195 76.6 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4
28773766 28773766 PRJNA1120060_P_NODE_1767007_length_282_cov_2.143541_g1748996_i0 PRJNA1120060 1767007 282 2.143541 6.04478562 Pinus patula amalgavirus 1 2058877 Viruses Viruses 120 3.21e-30   NR DAB41736.1 2058877 g1748996 i0 61.4 0.936170212765957 88 34 93.6 0 282 19 212 299 DAB41736.1 TPA_exp: ORF1p, partial [Pinus patula amalgavirus 1] diamond 264 120 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Amalgaviridae   Pinus patula amalgavirus 1
31649019 31649019 PRJNA1120060_P_NODE_2380457_length_258_cov_2.097297_g2362392_i0 PRJNA1120060 2380457 258 2.097297 5.41102626 Border disease virus 358764 Viruses Viruses 47.4 0.00103   NR AAA18909.1 358764 g2362392 i0 42.6 1.82558139534884 47 24 54.7 1 75 215 385 428 AAA18909.1 polyprotein; structural protein; glycoprotein, partial [Border disease virus] diamond 471 47.4 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus ovis
32787902 32787902 PRJNA1120060_P_NODE_678340_length_336_cov_4.197719_g660533_i0 PRJNA1120060 678340 336 4.197719 14.10433584 Poaceae Liege alphachrysovirus 2 2972876 Viruses Viruses 50.8 1.65e-4   NR UVG55906.1 2972876 g660533 i0 57.5 0.357142857142857 40 17 35.7 0 97 216 572 611 UVG55906.1 putative RNA-dependent RNA polymerase [Poaceae Liege alphachrysovirus 2] diamond 120 50.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Poaceae Liege alphachrysovirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;