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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 15 ✖

bioproject 1

  • PRJNA1120060 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26973690 26973690 PRJNA1120060_P_NODE_1938382_length_275_cov_2.178218_g1920358_i0 PRJNA1120060 1938382 275 2.178218 5.9900995 Methanobrevibacter sp. 66852 Archaea Archaea 48.1 6.43e-4   NR WP_292799713.1 66852 g1920358 i0 39.7 0.741818181818182 68 34 68.7 2 65 253 169 234 WP_292799713.1 class I SAM-dependent methyltransferase [Methanobrevibacter sp.] diamond 204 48.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27449063 27449063 PRJNA1120060_P_NODE_3410643_length_215_cov_4.830986_g3392523_i0 PRJNA1120060 3410643 215 4.830986 10.3866199 Methanobacterium 2160 Archaea Archaea 146 5.259999999999998e-42   NR WP_069583365.1 2160 g3392523 i0 93 2.97209302325581 71 5 99.1 0 214 2 37 107 WP_069583365.1 MULTISPECIES: flavodoxin family protein [Methanobacterium] diamond 639 146 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
27922023 27922023 PRJNA1120060_P_NODE_2733025_length_247_cov_5.528736_g2714941_i0 PRJNA1120060 2733025 247 5.528736 13.65597792 Methanococcaceae archaeon 2528253 Archaea Archaea 43.5 0.0196   NR HID47519.1 2528253 g2714941 i0 30.8 1.78542510121457 39 27 47.4 0 175 59 19 57 HID47519.1 radical SAM protein [Methanococcaceae archaeon] diamond 441 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae   Methanococcaceae archaeon
28522074 28522074 PRJNA1120060_P_NODE_2704587_length_248_cov_2.451429_g2686504_i0 PRJNA1120060 2704587 248 2.451429 6.07954392 Methanocaldococcus villosus 667126 Archaea Archaea 44.7 0.00828   NR WP_017980999.1 667126 g2686504 i0 45.2 1.01612903225806 42 20 50.8 1 204 79 399 437 WP_017980999.1 cohesin domain-containing protein [Methanocaldococcus villosus] diamond 252 44.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus
28617020 28617020 PRJNA1120060_P_NODE_2958387_length_242_cov_2.118343_g2940293_i0 PRJNA1120060 2958387 242 2.118343 5.12639006 Methanothermococcus okinawensis 155863 Archaea Archaea 42.7 0.0159   NR WP_013866548.1 155863 g2940293 i0 33.3 0.669421487603306 54 36 66.9 0 233 72 67 120 WP_013866548.1 hypothetical protein [Methanothermococcus okinawensis] diamond 162 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanothermococcus Methanothermococcus okinawensis
29374891 29374891 PRJNA1120060_P_NODE_3450569_length_211_cov_5.405797_g3432444_i0 PRJNA1120060 3450569 211 5.405797 11.40623167 Methanobacterium sp. 2164 Archaea Archaea 135 5.41e-36   NR MEN6292430.1 2164 g3432444 i0 97.1 1.96208530805687 69 2 98.1 0 210 4 127 195 MEN6292430.1 DUF5814 domain-containing protein [Methanobacterium sp.] diamond 414 135 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30132725 30132725 PRJNA1120060_P_NODE_637732_length_342_cov_4.345725_g619967_i0 PRJNA1120060 637732 342 4.345725 14.8623795 Methanobacteriales archaeon HGW-Methanobacteriales-1 2013815 Archaea Archaea 43.5 0.0248   NR PKL66576.1 2013815 g619967 i0 48.8 0.37719298245614 43 18 34.2 1 341 225 75 117 PKL66576.1 MAG: hypothetical protein CVV28_09230 [Methanobacteriales archaeon HGW-Methanobacteriales-1] diamond 129 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales     Methanobacteriales archaeon HGW-Methanobacteriales-1
30290621 30290621 PRJNA1120060_P_NODE_2516112_length_253_cov_2.500000_g2498040_i0 PRJNA1120060 2516112 253 2.5 6.325 Methanobacterium sp. 2164 Archaea Archaea 45.4 0.00466   NR MDO5836812.1 2164 g2498040 i0 36.5 0.74703557312253 63 40 74.7 0 34 222 47 109 MDO5836812.1 DUF460 domain-containing protein [Methanobacterium sp.] diamond 189 45.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30859305 30859305 PRJNA1120060_P_NODE_3022574_length_239_cov_13.765060_g3004475_i0 PRJNA1120060 3022574 239 13.76506 32.8984934 Methanobacterium sp. 2164 Archaea Archaea 94 1.84e-22   NR HML05427.1 2164 g3004475 i0 74.2 0.778242677824268 62 16 77.8 0 186 1 1 62 HML05427.1 hemerythrin domain-containing protein [Methanobacterium sp.] diamond 186 94 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31459223 31459223 PRJNA1120060_P_NODE_1797996_length_281_cov_1.355769_g1779984_i0 PRJNA1120060 1797996 281 1.355769 3.80971089 Methanococcus maripaludis 39152 Archaea Archaea 43.9 0.0231   NR WP_181505141.1 39152 g1779984 i0 28.9 0.811387900355872 76 53 80.1 1 247 23 311 386 WP_181505141.1 DEAD/DEAH box helicase [Methanococcus maripaludis] diamond 228 43.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
31586481 31586481 PRJNA1120060_P_NODE_2772176_length_247_cov_0.781609_g2754092_i0 PRJNA1120060 2772176 247 0.781609 1.93057423 Methanobrevibacter sp. 66852 Archaea Archaea 43.9 0.0159   NR MBR0371871.1 66852 g2754092 i0 41.7 1.1417004048583 48 25 54.7 1 148 14 968 1015 MBR0371871.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 282 43.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31734125 31734125 PRJNA1120060_P_NODE_2036977_length_271_cov_2.328283_g2018940_i0 PRJNA1120060 2036977 271 2.328283 6.30964693 Archaea 2157 Archaea Archaea 126 3.56e-32   NR PKL67444.1 2013815 g2018940 i0 72.2 3.46494464944649 90 25 99.6 0 2 271 325 414 PKL67444.1 MAG: hypothetical protein CVV28_06180 [Methanobacteriales archaeon HGW-Methanobacteriales-1] diamond 939 126 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales     Methanobacteriales archaeon HGW-Methanobacteriales-1
31776307 31776307 PRJNA1120060_P_NODE_330177_length_409_cov_1.470238_g312960_i0 PRJNA1120060 330177 409 1.470238 6.01327342 Methanobrevibacter sp. 66852 Archaea Archaea 47 0.00752   NR WP_405316112.1 66852 g312960 i0 38.4 0.535452322738386 73 34 49.1 3 66 266 516 583 WP_405316112.1 hypothetical protein, partial [Methanobrevibacter sp.] diamond 219 47 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31807810 31807810 PRJNA1120060_P_NODE_2961337_length_242_cov_1.810651_g2943243_i0 PRJNA1120060 2961337 242 1.810651 4.38177542 Methanobacterium 2160 Archaea Archaea 157 1.55e-44   NR WP_069584556.1 2160 g2943243 i0 92.5 0.991735537190083 80 6 99.2 0 2 241 128 207 WP_069584556.1 MULTISPECIES: DUF1972 domain-containing protein [Methanobacterium] diamond 240 157 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
31955664 31955664 PRJNA1120060_P_NODE_2595157_length_251_cov_1.471910_g2577080_i0 PRJNA1120060 2595157 251 1.47191 3.6944941 Methanobacterium 2160 Archaea Archaea 158 7.48e-43   NR WP_069581922.1 2160 g2577080 i0 89.2 2.97609561752988 83 9 99.2 0 2 250 123 205 WP_069581922.1 MULTISPECIES: DUF3656 domain-containing U32 family peptidase [Methanobacterium] diamond 747 159 0.993710691823899 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;