RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_phylum = "Chlamydiota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2780878 2780878 PRJNA1118794_P_NODE_10843_length_431_cov_0.860335_g10095_i0 PRJNA1118794 10843 431 0.860335 3.70804385 Chlamydiia 204429 Bacteria Bacteria 267 5.69e-84   NR KAF3362278.1 1910938 g10095 i0 86.6 17.7911832946636 142 19 98.8 0 6 431 207 348 KAF3362278.1 Phosphoenolpyruvate carboxykinase [GTP] [Chlamydiales bacterium STE3] diamond 7668 267 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium STE3
26964014 26964014 PRJNA1118794_P_NODE_72982_length_241_cov_0.916667_g72232_i0 PRJNA1118794 72982 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 129 7.29e-33   NR MCB1111706.1 2052156 g72232 i0 73.8 1.99170124481328 80 21 99.6 0 241 2 103 182 MCB1111706.1 NAD+ synthase [Chlamydiia bacterium] diamond 480 130 0.992307692307692 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
29026313 29026313 PRJNA1118794_P_NODE_57248_length_248_cov_0.880000_g56498_i0 PRJNA1118794 57248 248 0.88 2.1824 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 86.7 1.36e-17   NR HNA61571.1 2047756 g56498 i0 47.1 1.02822580645161 85 41 98 1 2 244 12 96 HNA61571.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 255 86.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29269381 29269381 PRJNA1118794_P_NODE_71869_length_242_cov_0.911243_g71119_i0 PRJNA1118794 71869 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 146 5.88e-39   NR WP_053331979.1 340071 g71119 i0 85 61.4628099173554 80 12 99.2 0 242 3 201 280 WP_053331979.1 phosphoenolpyruvate carboxykinase (GTP) [Criblamydia sequanensis] diamond 14874 147 0.993197278911565 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Candidatus Criblamydia Candidatus Criblamydia sequanensis
29436174 29436174 PRJNA1118794_P_NODE_74290_length_241_cov_0.916667_g73540_i0 PRJNA1118794 74290 241 0.916667 2.20916747 Simkania sp. 34094 Bacteria Bacteria 75.1 3.84e-14   NR MCB1084310.1 34094 g73540 i0 57.4 0.759336099585062 61 26 75.9 0 241 59 131 191 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 183 75.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30636647 30636647 PRJNA1118794_P_NODE_67133_length_243_cov_1.700000_g66383_i0 PRJNA1118794 67133 243 1.7 4.131 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 80.1 2.4e-15   NR HEV8051001.1 2052176 g66383 i0 46.3 2.96296296296296 80 43 98.8 0 3 242 162 241 HEV8051001.1 deoxyribodipyrimidine photo-lyase [Parachlamydiaceae bacterium] diamond 720 80.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31300413 31300413 PRJNA1118794_P_NODE_75535_length_229_cov_2.474359_g74785_i0 PRJNA1118794 75535 229 2.474359 5.66628211 Simkania sp. 34094 Bacteria Bacteria 102 1.03e-24   NR MCB1084310.1 34094 g74785 i0 60.8 0.96943231441048 74 29 96.9 0 6 227 108 181 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 222 102 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31932936 31932936 PRJNA1118794_P_NODE_68997_length_243_cov_0.905882_g68247_i0 PRJNA1118794 68997 243 0.905882 2.20129326 Chlamydiota bacterium 2081524 Bacteria Bacteria 48.1 4.85e-4   NR MBI1870221.1 2081524 g68247 i0 44.3 1.49382716049383 61 26 69.1 3 177 10 881 938 MBI1870221.1 fibronectin type III domain-containing protein [Chlamydiota bacterium] diamond 363 48.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32525537 32525537 PRJNA1118794_P_NODE_66759_length_244_cov_0.900585_g66009_i0 PRJNA1118794 66759 244 0.900585 2.1974274 Chlamydiia 204429 Bacteria Bacteria 154 6.749999999999998e-43   NR WP_044881192.1 1478175 g66009 i0 87.5 6.88524590163934 80 10 98.4 0 242 3 280 359 WP_044881192.1 PhoH family protein [Neochlamydia sp. EPS4] diamond 1680 154 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia sp. EPS4

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;