RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1118794 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4057897 4057897 PRJNA1118794_P_NODE_73104_length_241_cov_0.916667_g72354_i0 PRJNA1118794 73104 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 162 1.8e-46   NR HEY4160915.1 2973664 g72354 i0 88.8 0.995850622406639 80 9 99.6 0 240 1 189 268 HEY4160915.1 glycoside hydrolase family 57 protein [Candidatus Saccharimonadales bacterium] diamond 240 162 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
7883775 7883775 PRJNA1118794_P_NODE_51347_length_250_cov_0.870056_g50597_i0 PRJNA1118794 51347 250 0.870056 2.17514 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 126 2.31e-35   NR MEJ0072973.1 2026720 g50597 i0 85.7 2.772 77 11 92.4 0 231 1 1 77 MEJ0072973.1 30S ribosomal protein S8 [Candidatus Saccharibacteria bacterium] diamond 693 126 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28931354 28931354 PRJNA1118794_P_NODE_73288_length_241_cov_0.916667_g72538_i0 PRJNA1118794 73288 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 95.5 8.270000000000001e-21   NR HEY4160819.1 2973664 g72538 i0 58.8 0.995850622406639 80 33 99.6 0 1 240 411 490 HEY4160819.1 glycosyltransferase [Candidatus Saccharimonadales bacterium] diamond 240 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31205075 31205075 PRJNA1118794_P_NODE_61595_length_246_cov_0.890173_g60845_i0 PRJNA1118794 61595 246 0.890173 2.18982558 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 151 9.999999999999999e-43   NR HEY4160458.1 2973664 g60845 i0 85.2 0.98780487804878 81 12 98.8 0 244 2 261 341 HEY4160458.1 endolytic transglycosylase MltG [Candidatus Saccharimonadales bacterium] diamond 243 151 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31521954 31521954 PRJNA1118794_P_NODE_56776_length_248_cov_0.880000_g56026_i0 PRJNA1118794 56776 248 0.88 2.1824 Candidatus Nanosynbacter sp. P2B_S1_bin.0.1 2962903 Bacteria Bacteria 63.5 6.31e-10   NR MCP9492590.1 2962903 g56026 i0 47.4 0.919354838709677 76 36 90.7 2 21 245 125 197 MCP9492590.1 methyltransferase domain-containing protein [Candidatus Nanosynbacter sp. P2B_S1_bin.0.1] diamond 228 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. P2B_S1_bin.0.1
31964535 31964535 PRJNA1118794_P_NODE_50718_length_250_cov_1.344633_g49968_i0 PRJNA1118794 50718 250 1.344633 3.3615825 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 66.6 7.77e-12   NR MBP7837087.1 2026720 g49968 i0 67.4 1.032 43 14 51.6 0 1 129 73 115 MBP7837087.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 258 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32376077 32376077 PRJNA1118794_P_NODE_33219_length_284_cov_1.355450_g32469_i0 PRJNA1118794 33219 284 1.35545 3.849478 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 80.1 2.88e-15   NR HEY4160883.1 2973664 g32469 i0 50.5 1.08802816901408 103 41 98.2 2 4 282 93 195 HEY4160883.1 G1 family glutamic endopeptidase [Candidatus Saccharimonadales bacterium] diamond 309 80.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;