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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 30 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1118794 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2781551 2781551 PRJNA1118794_P_NODE_66383_length_244_cov_0.900585_g65633_i0 PRJNA1118794 66383 244 0.900585 2.1974274 Bacteriovorax 146784 Bacteria Bacteria 113 2.1900000000000003e-27   NR MBP9680904.1 2608087 g65633 i0 64.1 3.77459016393443 78 28 95.9 0 11 244 99 176 MBP9680904.1 FAD binding domain-containing protein [Bacteriovorax sp.] diamond 921 114 0.991228070175439 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
15533039 15533039 PRJNA1118794_P_NODE_18753_length_346_cov_2.435897_g18003_i0 PRJNA1118794 18753 346 2.435897 8.42820362 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 214 1.06e-65   NR MCB0368368.1 2053517 g18003 i0 89.6 1.98554913294798 115 12 99.7 0 2 346 194 308 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 687 214 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
24457269 24457269 PRJNA1118794_P_NODE_69260_length_243_cov_0.905882_g68510_i0 PRJNA1118794 69260 243 0.905882 2.20129326 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 151 5.65e-41   NR MCK6594349.1 2081706 g68510 i0 91.3 0.987654320987654 80 7 98.8 0 3 242 210 289 MCK6594349.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Bacteriovoracaceae bacterium] diamond 240 151 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
26688188 26688188 PRJNA1118794_P_NODE_41261_length_266_cov_1.430052_g40511_i0 PRJNA1118794 41261 266 1.430052 3.80393832 Oligoflexia bacterium 2599941 Bacteria Bacteria 43.9 0.0191   NR MBX7137211.1 2599941 g40511 i0 35.5 2.40225563909774 76 48 84.6 1 250 26 138 213 MBX7137211.1 hypothetical protein [Oligoflexia bacterium] diamond 639 43.9 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
26964013 26964013 PRJNA1118794_P_NODE_71382_length_242_cov_0.911243_g70632_i0 PRJNA1118794 71382 242 0.911243 2.20520806 Bdellovibrionota 3018035 Bacteria Bacteria 72 1.01e-12   NR MEN0058068.1 28201 g70632 i0 58.5 1.95867768595041 53 22 65.7 0 240 82 248 300 MEN0058068.1 4,5-DOPA dioxygenase extradiol [Bdellovibrio sp.] diamond 474 72.4 0.994475138121547 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
27004652 27004652 PRJNA1118794_P_NODE_32782_length_285_cov_1.358491_g32032_i0 PRJNA1118794 32782 285 1.358491 3.87169935 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 97.8 6.189999999999999e-23   NR MCB0369273.1 2053517 g32032 i0 58.5 0.989473684210526 94 34 97.9 2 281 3 74 163 MCB0369273.1 hypothetical protein [Bdellovibrionales bacterium] diamond 282 97.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27225954 27225954 PRJNA1118794_P_NODE_60423_length_246_cov_0.890173_g59673_i0 PRJNA1118794 60423 246 0.890173 2.18982558 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 147 3.08e-40   NR MCB0350595.1 2053517 g59673 i0 84 0.98780487804878 81 13 98.8 0 2 244 292 372 MCB0350595.1 L-aspartate oxidase [Bdellovibrionales bacterium] diamond 243 147 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27501658 27501658 PRJNA1118794_P_NODE_65063_length_244_cov_0.900585_g64313_i0 PRJNA1118794 65063 244 0.900585 2.1974274 Bdellovibrio 958 Bacteria Bacteria 126 2.6099999999999993e-34   NR WP_374074978.1 959 g64313 i0 69.1 3.98360655737705 81 25 99.6 0 243 1 25 105 WP_374074978.1 HAD family hydrolase [Bdellovibrio bacteriovorus] diamond 972 126 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
27700246 27700246 PRJNA1118794_P_NODE_58524_length_247_cov_0.885057_g57774_i0 PRJNA1118794 58524 247 0.885057 2.18609079 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 95.1 1.49e-20   NR MEK6772824.1 3034175 g57774 i0 67.1 3.94736842105263 79 26 96 0 10 246 872 950 MEK6772824.1 chromosome segregation protein SMC [Bdellovibrionota bacterium] diamond 975 95.1 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27984036 27984036 PRJNA1118794_P_NODE_9325_length_462_cov_1.979434_g8577_i0 PRJNA1118794 9325 462 1.979434 9.14498508 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 47.8 0.00644   NR MCB0348069.1 2053517 g8577 i0 33.6 0.753246753246753 116 49 64.3 5 161 457 409 513 MCB0348069.1 PKD domain-containing protein [Bdellovibrionales bacterium] diamond 348 47.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28204882 28204882 PRJNA1118794_P_NODE_72546_length_241_cov_0.916667_g71796_i0 PRJNA1118794 72546 241 0.916667 2.20916747 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 162 1.09e-46   NR MCK6594408.1 2081706 g71796 i0 97.5 0.995850622406639 80 2 99.6 0 240 1 251 330 MCK6594408.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 240 162 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28268036 28268036 PRJNA1118794_P_NODE_53886_length_249_cov_0.875000_g53136_i0 PRJNA1118794 53886 249 0.875 2.17875 uncultured Bdellovibrio sp. 239744 Bacteria Bacteria 123 2.56e-32   NR WP_295900990.1 239744 g53136 i0 66.3 3.8433734939759 80 27 96.4 0 249 10 215 294 WP_295900990.1 DUF72 domain-containing protein [uncultured Bdellovibrio sp.] diamond 957 123 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio uncultured Bdellovibrio sp.
28584092 28584092 PRJNA1118794_P_NODE_42907_length_262_cov_1.825397_g42157_i0 PRJNA1118794 42907 262 1.825397 4.78254014 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 135 2.68e-38   NR MBP9675022.1 2081706 g42157 i0 86.8 0.870229007633588 76 10 87 0 229 2 6 81 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 228 135 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28804716 28804716 PRJNA1118794_P_NODE_28628_length_298_cov_1.311111_g27878_i0 PRJNA1118794 28628 298 1.311111 3.90711078 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 125 3.639999999999999e-35   NR MCB0369368.1 2053517 g27878 i0 63.4 0.825503355704698 82 30 82.6 0 50 295 1 82 MCB0369368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 246 125 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28931337 28931337 PRJNA1118794_P_NODE_51468_length_250_cov_0.870056_g50718_i0 PRJNA1118794 51468 250 0.870056 2.17514 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 129 3.22e-34   NR WP_061833848.1 959 g50718 i0 77.8 1.728 72 16 86.4 0 249 34 244 315 WP_061833848.1 prolyl aminopeptidase [Bdellovibrio bacteriovorus] diamond 432 129 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
28985711 28985711 PRJNA1118794_P_NODE_75788_length_226_cov_2.830065_g75038_i0 PRJNA1118794 75788 226 2.830065 6.3959469 Bacteria 2 Bacteria Bacteria 92 2.82e-20   NR MER2520763.1 2053517 g75038 i0 58.7 9.95575221238938 75 31 99.6 0 226 2 38 112 MER2520763.1 4-hydroxy-tetrahydrodipicolinate synthase [Bdellovibrionales bacterium] diamond 2250 92.8 0.991379310344828 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29301240 29301240 PRJNA1118794_P_NODE_30929_length_290_cov_0.958525_g30179_i0 PRJNA1118794 30929 290 0.958525 2.7797225 Pseudomonadati 3379134 Bacteria Bacteria 153 1.6899999999999996e-41   NR HLW57827.1 2081706 g30179 i0 79.6 1.92413793103448 93 19 96.2 0 10 288 93 185 HLW57827.1 threonine--tRNA ligase [Bacteriovoracaceae bacterium] diamond 558 153 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29341847 29341847 PRJNA1118794_P_NODE_68349_length_243_cov_0.905882_g67599_i0 PRJNA1118794 68349 243 0.905882 2.20129326 Bdellovibrio sp. 28201 Bacteria Bacteria 70.5 5.55e-12   NR MFM6930385.1 28201 g67599 i0 39.2 2.93827160493827 79 48 97.5 0 5 241 251 329 MFM6930385.1 RNA methyltransferase [Bdellovibrio sp.] diamond 714 70.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
29742984 29742984 PRJNA1118794_P_NODE_68810_length_243_cov_0.905882_g68060_i0 PRJNA1118794 68810 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 92.4 1.17e-22   NR WP_321397004.1 28202 g68060 i0 65.2 3.28395061728395 66 23 81.5 0 239 42 1 66 WP_321397004.1 hypothetical protein [Peredibacter starrii] diamond 798 92.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
29783721 29783721 PRJNA1118794_P_NODE_54331_length_249_cov_0.875000_g53581_i0 PRJNA1118794 54331 249 0.875 2.17875 Pseudobdellovibrio sp. 2862747 Bacteria Bacteria 86.7 1.39e-17   NR MCC2677799.1 2862747 g53581 i0 55 1.87951807228916 80 36 96.4 0 247 8 120 199 MCC2677799.1 hypothetical protein [Pseudobdellovibrio sp.] diamond 468 86.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp.
29846979 29846979 PRJNA1118794_P_NODE_33191_length_284_cov_1.421801_g32441_i0 PRJNA1118794 33191 284 1.421801 4.03791484 Bacteriovorax stolpii 960 Bacteria Bacteria 184 1.59e-54   NR WP_102244575.1 960 g32441 i0 91.5 1.98591549295775 94 8 99.3 0 284 3 150 243 WP_102244575.1 exodeoxyribonuclease VII large subunit [Bacteriovorax stolpii] diamond 564 184 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
29878678 29878678 PRJNA1118794_P_NODE_70611_length_242_cov_0.911243_g69861_i0 PRJNA1118794 70611 242 0.911243 2.20520806 Silvanigrellales bacterium 2767476 Bacteria Bacteria 49.3 1.86e-4   NR MCA2961322.1 2767476 g69861 i0 57.8 0.557851239669422 45 18 54.5 1 241 110 1394 1438 MCA2961322.1 hypothetical protein [Silvanigrellales bacterium] diamond 135 49.3 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales     Silvanigrellales bacterium
30352991 30352991 PRJNA1118794_P_NODE_73112_length_241_cov_0.916667_g72362_i0 PRJNA1118794 73112 241 0.916667 2.20916747 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 71.6 1.89e-13   NR MFA7276197.1 2026715 g72362 i0 60.7 4.96680497925311 56 22 69.7 0 169 2 2 57 MFA7276197.1 single-stranded DNA-binding protein [Pseudobdellovibrionaceae bacterium] diamond 1197 71.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31173542 31173542 PRJNA1118794_P_NODE_18535_length_348_cov_1.065455_g17785_i0 PRJNA1118794 18535 348 1.065455 3.7077834 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 157 1.9699999999999998e-47   NR MCB0369402.1 2053517 g17785 i0 75.5 0.844827586206897 98 24 84.5 0 345 52 1 98 MCB0369402.1 hypothetical protein [Bdellovibrionales bacterium] diamond 294 157 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31268776 31268776 PRJNA1118794_P_NODE_33615_length_283_cov_1.404762_g32865_i0 PRJNA1118794 33615 283 1.404762 3.97547646 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 179 2.81e-51   NR MEZ0390646.1 2026715 g32865 i0 88.3 2.98939929328622 94 11 99.6 0 283 2 401 494 MEZ0390646.1 HD family phosphohydrolase [Pseudobdellovibrionaceae bacterium] diamond 846 179 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31331987 31331987 PRJNA1118794_P_NODE_63736_length_245_cov_0.895349_g62986_i0 PRJNA1118794 63736 245 0.895349 2.19360505 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 80.9 2.35e-16   NR WP_253696934.1 959 g62986 i0 67.9 0.648979591836735 53 17 64.9 0 168 10 1 53 WP_253696934.1 coenzyme F420-0:L-glutamate ligase [Bdellovibrio bacteriovorus] diamond 159 80.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
31901379 31901379 PRJNA1118794_P_NODE_63377_length_245_cov_0.895349_g62627_i0 PRJNA1118794 63377 245 0.895349 2.19360505 Bdellovibrio sp. HCB2-146 3394362 Bacteria Bacteria 75.1 1.07e-13   NR WP_413938689.1 3394362 g62627 i0 43.2 0.991836734693878 81 46 99.2 0 244 2 35 115 WP_413938689.1 hypothetical protein [Bdellovibrio sp. HCB2-146] diamond 243 75.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB2-146
32091242 32091242 PRJNA1118794_P_NODE_62738_length_245_cov_0.895349_g61988_i0 PRJNA1118794 62738 245 0.895349 2.19360505 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 97.4 1.91e-21   NR MBT4760165.1 2026715 g61988 i0 59.3 0.991836734693878 81 32 98 1 6 245 1 81 MBT4760165.1 NADH-quinone oxidoreductase subunit M [Pseudobdellovibrionaceae bacterium] diamond 243 97.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
32660037 32660037 PRJNA1118794_P_NODE_51960_length_250_cov_0.870056_g51210_i0 PRJNA1118794 51960 250 0.870056 2.17514 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 121 2.71e-30   NR MCB0350443.1 2053517 g51210 i0 66.7 0.972 81 27 97.2 0 1 243 344 424 MCB0350443.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Bdellovibrionales bacterium] diamond 243 121 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32682626 32682626 PRJNA1118794_P_NODE_65740_length_244_cov_0.900585_g64990_i0 PRJNA1118794 65740 244 0.900585 2.1974274 Bdellovibrionota 3018035 Bacteria Bacteria 56.6 4.57e-7   NR MBA2406110.1 2053517 g64990 i0 39 3 82 44 93.4 1 9 236 83 164 MBA2406110.1 hypothetical protein [Bdellovibrionales bacterium] diamond 732 57 0.992982456140351 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;