RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1118794 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6608641 6608641 PRJNA1118794_P_NODE_30966_length_289_cov_3.314815_g30216_i0 PRJNA1118794 30966 289 3.314815 9.57981535 Armatimonadota bacterium 2033014 Bacteria Bacteria 130 3.97e-33   NR MBS1726118.1 2033014 g30216 i0 64.6 3.93425605536332 96 31 99.7 1 288 1 340 432 MBS1726118.1 MmgE/PrpD family protein [Armatimonadota bacterium] diamond 1137 130 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30794687 30794687 PRJNA1118794_P_NODE_64654_length_244_cov_1.801170_g63904_i0 PRJNA1118794 64654 244 1.80117 4.3948548 Capsulimonadales bacterium 2971800 Bacteria Bacteria 107 2.38e-26   NR MDX1931059.1 2971800 g63904 i0 70.7 0.922131147540984 75 22 92.2 0 243 19 208 282 MDX1931059.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase [Capsulimonadales bacterium] diamond 225 107 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
31363801 31363801 PRJNA1118794_P_NODE_49096_length_251_cov_0.865169_g48346_i0 PRJNA1118794 49096 251 0.865169 2.17157419 Armatimonadota bacterium 2033014 Bacteria Bacteria 84 8.12e-18   NR MCA0362111.1 2033014 g48346 i0 52.4 2.00796812749004 82 38 98 1 2 247 88 168 MCA0362111.1 GNAT family N-acetyltransferase [Armatimonadota bacterium] diamond 504 84 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31734031 31734031 PRJNA1118794_P_NODE_70617_length_242_cov_0.911243_g69867_i0 PRJNA1118794 70617 242 0.911243 2.20520806 PVC group 1783257 Bacteria Bacteria 97.1 2.5600000000000003e-21   NR MBI3922192.1 2033014 g69867 i0 55.7 2.93801652892562 79 29 96.7 2 4 237 133 206 MBI3922192.1 hypothetical protein [Armatimonadota bacterium] diamond 711 97.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32786085 32786085 PRJNA1118794_P_NODE_29640_length_294_cov_1.217195_g28890_i0 PRJNA1118794 29640 294 1.217195 3.5785533 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.5 0.0362   NR MCC6446865.1 2033014 g28890 i0 51.2 0.418367346938776 41 18 40.8 2 75 194 13 52 MCC6446865.1 DUF4091 domain-containing protein [Armatimonadota bacterium] diamond 123 43.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;