RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA1118794 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27415956 27415956 PRJNA1118794_P_NODE_27823_length_301_cov_1.350877_g27073_i0 PRJNA1118794 27823 301 1.350877 4.06613977 Banana streak MY virus 1476909 Viruses Viruses 47 0.00252   NR QVG60622.1 1476909 g27073 i0 31 0.578073089700997 58 38 57.8 1 180 7 853 908 QVG60622.1 ORFIII polyprotein [Banana streak MY virus] diamond 174 47 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Badnavirus Badnavirus gammavirgamusae
27952515 27952515 PRJNA1118794_P_NODE_31285_length_289_cov_1.134259_g30535_i0 PRJNA1118794 31285 289 1.134259 3.27800851 Bovine leukemia virus 11901 Viruses Viruses 44.3 0.019   NR BDY33775.1 11901 g30535 i0 66.7 0.249134948096886 24 8 24.9 0 72 1 343 366 BDY33775.1 gag-pro-pol polyprotein [Bovine leukemia virus] diamond 72 44.3 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Deltaretrovirus Deltaretrovirus bovleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;