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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1118794" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1118794 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27352772 27352772 PRJNA1118794_P_NODE_39463_length_270_cov_1.274112_g38713_i0 PRJNA1118794 39463 270 1.274112 3.4401024 Thermoplasmatota archaeon 2806419 Archaea Archaea 125 2.1399999999999997e-31   NR HET6405799.1 2806419 g38713 i0 71.3 1.93333333333333 87 25 96.7 0 263 3 17 103 HET6405799.1 malate synthase A [Thermoplasmatota archaeon] diamond 522 125 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28015776 28015776 PRJNA1118794_P_NODE_6045_length_573_cov_2.138000_g5307_i0 PRJNA1118794 6045 573 2.138 12.25074 Euryarchaeota archaeon TMED1 2026739 Archaea Archaea 46.2 0.0377   NR OUV39351.1 1986682 g5307 i0 26.7 0.450261780104712 86 63 45 0 102 359 224 309 OUV39351.1 MAG: hypothetical protein CBC63_04155 [Euryarchaeota archaeon TMED103] diamond 258 46.2 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon TMED103
28047153 28047153 PRJNA1118794_P_NODE_32165_length_286_cov_2.652582_g31415_i0 PRJNA1118794 32165 286 2.652582 7.58638452 Methanothrix sp. 90426 Archaea Archaea 54.3 5.47e-6   NR HPJ29788.1 90426 g31415 i0 44.1 0.618881118881119 59 27 55.6 1 262 104 555 613 HPJ29788.1 beta/gamma crystallin-related protein [Methanothrix sp.] diamond 177 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28710420 28710420 PRJNA1118794_P_NODE_60667_length_246_cov_0.890173_g59917_i0 PRJNA1118794 60667 246 0.890173 2.18982558 Halalkalicoccus jeotgali 413810 Archaea Archaea 103 8.469999999999998e-24   NR WP_049934778.1 413810 g59917 i0 76.2 1.53658536585366 63 15 76.8 0 3 191 281 343 WP_049934778.1 hypothetical protein [Halalkalicoccus jeotgali] diamond 378 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
28859033 28859033 PRJNA1118794_P_NODE_20708_length_334_cov_2.291188_g19958_i0 PRJNA1118794 20708 334 2.291188 7.65256792 root 1 Root_unresolved Root_unresolved 53.9 1.32e-5   NR WP_256401952.1 755306 g19958 i0 53.7 1.3562874251497 54 22 47.6 2 150 308 2312 2363 WP_256401952.1 malectin domain-containing carbohydrate-binding protein [Haloarchaeobius litoreus] diamond 453 54.3 0.992633517495396 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halorubellaceae Haloarchaeobius Haloarchaeobius litoreus
29120921 29120921 PRJNA1118794_P_NODE_50489_length_250_cov_1.740113_g49739_i0 PRJNA1118794 50489 250 1.740113 4.3502825 Methanolobus zinderi 536044 Archaea Archaea 71.2 3.83e-12   NR WP_176965193.1 536044 g49739 i0 37.7 0.924 77 45 88.8 1 226 5 493 569 WP_176965193.1 PKD domain-containing protein [Methanolobus zinderi] diamond 231 71.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus zinderi
29404885 29404885 PRJNA1118794_P_NODE_40809_length_267_cov_1.335052_g40059_i0 PRJNA1118794 40809 267 1.335052 3.56458884 Halobacteriota archaeon 3100168 Archaea Archaea 78.6 1.22e-14   NR MDY6866055.1 3100168 g40059 i0 50 1.93258426966292 86 40 93.3 1 3 251 210 295 MDY6866055.1 PEP/pyruvate-binding domain-containing protein [Halobacteriota archaeon] diamond 516 78.6 1 Archaea   Methanobacteriati Halobacteriota         Halobacteriota archaeon
29593963 29593963 PRJNA1118794_P_NODE_59070_length_247_cov_0.885057_g58320_i0 PRJNA1118794 59070 247 0.885057 2.18609079 Methanospirillum stamsii 1277351 Archaea Archaea 123 1.5e-30   NR WP_109941090.1 1277351 g58320 i0 85 0.728744939271255 60 9 72.9 0 181 2 516 575 WP_109941090.1 PKD domain-containing protein [Methanospirillum stamsii] diamond 180 123 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum stamsii
29688671 29688671 PRJNA1118794_P_NODE_22810_length_323_cov_1.760000_g22060_i0 PRJNA1118794 22810 323 1.76 5.6848 Methanobacteriota archaeon 2026739 Archaea Archaea 86.3 8.97e-19   NR MBD38822.1 2026739 g22060 i0 40.8 0.956656346749226 103 58 92.9 1 3 302 53 155 MBD38822.1 hypothetical protein [Methanobacteriota archaeon] diamond 309 86.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30122107 30122107 PRJNA1118794_P_NODE_35132_length_279_cov_2.237864_g34382_i0 PRJNA1118794 35132 279 2.237864 6.24364056 root 1 Root_unresolved Root_unresolved 46.6 0.00253   NR MDD1700180.1 2052170 g34382 i0 31.9 2 91 59 96.8 3 9 278 356 444 MDD1700180.1 PKD domain-containing protein [Methanoregula sp.] diamond 558 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30257946 30257946 PRJNA1118794_P_NODE_46932_length_254_cov_1.491713_g46182_i0 PRJNA1118794 46932 254 1.491713 3.78895102 Methanoregula sp. 2052170 Archaea Archaea 54.7 2.73e-6   NR MDP3396888.1 2052170 g46182 i0 40.7 4.78346456692913 81 43 94.5 3 14 253 170 246 MDP3396888.1 PKD domain-containing protein [Methanoregula sp.] diamond 1215 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
31268805 31268805 PRJNA1118794_P_NODE_69535_length_242_cov_1.911243_g68785_i0 PRJNA1118794 69535 242 1.911243 4.62520806 Methanobacteriota archaeon 2026739 Archaea Archaea 84 2.35e-17   NR HHD16766.1 2026739 g68785 i0 49.4 0.979338842975207 79 40 97.9 0 240 4 23 101 HHD16766.1 hypothetical protein [Methanobacteriota archaeon] diamond 237 84 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31806492 31806492 PRJNA1118794_P_NODE_75137_length_234_cov_2.391304_g74387_i0 PRJNA1118794 75137 234 2.391304 5.59565136 Haladaptatus salinisoli 2884876 Archaea Archaea 42.4 0.0447   NR WP_227353393.1 2884876 g74387 i0 38.3 0.769230769230769 60 32 70.5 1 179 15 467 526 WP_227353393.1 ArnT family glycosyltransferase [Haladaptatus salinisoli] diamond 180 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus salinisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;