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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1115053" and tax_superkingdom = "Viruses"

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tax_kingdom 3

tax_superkingdom 1

  • Viruses · 17 ✖

bioproject 1

  • PRJNA1115053 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11708284 11708284 PRJNA1115053_S_NODE_850_length_1920_cov_57.183804_g481_i0 PRJNA1115053 850 1920 57.183804 1097.9290368 Gammaretrovirus 153135 Viruses Viruses 1156 0   NR NP_040333.1 11795 g481 i0 96.3 5.5453125 592 22 92.5 0 143 1918 144 735 NP_040333.1 RNA-dependent DNA polymerase, partial [Friend murine leukemia virus] diamond 10647 1165 0.992274678111588 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28299687 28299687 PRJNA1115053_S_NODE_256866_length_173_cov_2.323077_g255049_i0 PRJNA1115053 256866 173 2.323077 4.01892321 Erythrocytic necrosis virus 1543320 Viruses Viruses 96.3 4.59e-24   NR QCF47486.1 1543320 g255049 i0 79.3 1.00578034682081 58 11 98.8 1 3 173 33 90 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 174 96.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
28520843 28520843 PRJNA1115053_S_NODE_264227_length_171_cov_1.703125_g262410_i0 PRJNA1115053 264227 171 1.703125 2.91234375 Larimichthys croaker adintovirus 2609857 Viruses Viruses 90.5 9.22e-20   NR DAC81309.1 2609857 g262410 i0 75 2.92982456140351 56 14 98.2 0 3 170 155 210 DAC81309.1 TPA_asm: integrase [Larimichthys croaker adintovirus] diamond 501 90.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
28647155 28647155 PRJNA1115053_S_NODE_154787_length_216_cov_5.098266_g152970_i0 PRJNA1115053 154787 216 5.098266 11.01225456 Erythrocytic necrosis virus 1543320 Viruses Viruses 48.9 2.46e-5   NR QCF47491.1 1543320 g152970 i0 54.3 0.638888888888889 46 18 61.1 2 172 41 24 68 QCF47491.1 RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 138 48.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29562581 29562581 PRJNA1115053_S_NODE_149030_length_220_cov_1.627119_g147213_i0 PRJNA1115053 149030 220 1.627119 3.5796618 Erythrocytic necrosis virus 1543320 Viruses Viruses 74.7 8.6e-16   NR QCF47522.1 1543320 g147213 i0 76.6 1.97727272727273 47 11 64.1 0 25 165 21 67 QCF47522.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 435 74.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29941786 29941786 PRJNA1115053_S_NODE_260851_length_172_cov_1.705426_g259034_i0 PRJNA1115053 260851 172 1.705426 2.93333272 Erythrocytic necrosis virus 1543320 Viruses Viruses 96.7 3.2299999999999997e-24   NR QCF47486.1 1543320 g259034 i0 83 0.924418604651163 53 9 92.4 0 14 172 1 53 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 159 96.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29941789 29941789 PRJNA1115053_S_NODE_303031_length_160_cov_2.461538_g301214_i0 PRJNA1115053 303031 160 2.461538 3.9384608 Larimichthys croaker adintovirus 2609857 Viruses Viruses 69.3 4.42e-12   NR DAC81309.1 2609857 g301214 i0 60.8 1.9125 51 20 95.6 0 153 1 230 280 DAC81309.1 TPA_asm: integrase [Larimichthys croaker adintovirus] diamond 306 69.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
30122101 30122101 PRJNA1115053_S_NODE_64272_length_307_cov_2.223485_g62455_i0 PRJNA1115053 64272 307 2.223485 6.8260989500000004 Viruses 10239 Viruses Viruses 80.5 8.95e-16   NR DAC81253.1 2609866 g62455 i0 66.1 1.1628664495114 62 18 60.6 1 186 1 162 220 DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] diamond 357 81.3 0.990159901599016 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
30248879 30248879 PRJNA1115053_S_NODE_100832_length_258_cov_2.455814_g99015_i0 PRJNA1115053 100832 258 2.455814 6.33600012 Viruses 10239 Viruses Viruses 73.6 6.44e-13   NR AVM87439.1 2116200 g99015 i0 48.1 1.75581395348837 79 37 87.2 1 33 257 917 995 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 453 73.9 0.995940460081191 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wuhan sharpbelly picornavirus 1
30889571 30889571 PRJNA1115053_S_NODE_71814_length_294_cov_21.505976_g69997_i0 PRJNA1115053 71814 294 21.505976 63.22756944 Moloney murine leukemia virus 11801 Viruses Viruses 154 6.21e-41   NR NP_057933.2 11801 g69997 i0 97.5 0.816326530612245 80 2 81.6 0 292 53 1256 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 240 154 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31141893 31141893 PRJNA1115053_S_NODE_332335_length_153_cov_1.900000_g330518_i0 PRJNA1115053 332335 153 1.9 2.907 Pimephales minnow adintovirus 2609864 Viruses Viruses 56.2 1.24e-7   NR DAC81394.1 2609864 g330518 i0 68.6 0.686274509803922 35 11 68.6 0 105 1 7 41 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 105 56.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31426800 31426800 PRJNA1115053_S_NODE_109896_length_249_cov_4.893204_g108079_i0 PRJNA1115053 109896 249 4.893204 12.18407796 Marsupial endogenous gammaretrovirus 2 3386030 Viruses Viruses 61.2 1.19e-8   NR DBA62710.1 3386030 g108079 i0 51.7 1.44578313253012 60 29 72.3 0 3 182 425 484 DBA62710.1 TPA_asm: Gag [Marsupial endogenous gammaretrovirus 2] diamond 360 61.2 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Marsupial endogenous gammaretrovirus 2
31711526 31711526 PRJNA1115053_S_NODE_258357_length_173_cov_1.292308_g256540_i0 PRJNA1115053 258357 173 1.292308 2.23569284 Erythrocytic necrosis virus 1543320 Viruses Viruses 41.6 0.0134   NR QCF47486.1 1543320 g256540 i0 60.7 0.485549132947977 28 11 48.6 0 24 107 59 86 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 84 41.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31734013 31734013 PRJNA1115053_S_NODE_298377_length_162_cov_0.899160_g296560_i0 PRJNA1115053 298377 162 0.89916 1.4566392 Viruses 10239 Viruses Viruses 71.6 6.5e-13   NR DAC81309.1 2609857 g296560 i0 66.7 3.55555555555556 48 16 88.9 0 3 146 189 236 DAC81309.1 TPA_asm: integrase [Larimichthys croaker adintovirus] diamond 576 71.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
31869596 31869596 PRJNA1115053_S_NODE_84497_length_277_cov_1.747863_g82680_i0 PRJNA1115053 84497 277 1.747863 4.84158051 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 45.1 0.00388   NR DAC81251.1 2609866 g82680 i0 26.6 0.693140794223827 64 47 69.3 0 25 216 65 128 DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] diamond 192 45.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
32249709 32249709 PRJNA1115053_S_NODE_197538_length_195_cov_1.302632_g195721_i0 PRJNA1115053 197538 195 1.302632 2.5401324 Erythrocytic necrosis virus 1543320 Viruses Viruses 72.8 2.08e-14   NR QCF47477.1 1543320 g195721 i0 65.6 0.984615384615385 64 19 95.4 2 190 5 35 97 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 192 72.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
32849099 32849099 PRJNA1115053_S_NODE_330200_length_154_cov_1.297297_g328383_i0 PRJNA1115053 330200 154 1.297297 1.99783738 Erythrocytic necrosis virus 1543320 Viruses Viruses 80.1 1.63e-17   NR QCF47477.1 1543320 g328383 i0 73.5 1.90909090909091 49 13 95.5 0 4 150 84 132 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 294 80.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;