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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA1115053" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 23 ✖

bioproject 1

  • PRJNA1115053 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2300060 2300060 PRJNA1115053_S_NODE_64042_length_307_cov_4.568182_g62225_i0 PRJNA1115053 64042 307 4.568182 14.02431874 Chlamydiota bacterium 2081524 Bacteria Bacteria 94.4 3.59e-22   NR MBM3198081.1 2081524 g62225 i0 91.7 2.34527687296417 48 4 46.9 0 162 305 1 48 MBM3198081.1 50S ribosomal protein L17 [Chlamydiota bacterium] diamond 720 94.4 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
26719436 26719436 PRJNA1115053_S_NODE_148521_length_220_cov_2.440678_g146704_i0 PRJNA1115053 148521 220 2.440678 5.3694916 Phycisphaerales bacterium 2052180 Bacteria Bacteria 42.7 0.0266   NR MCH2162800.1 2052180 g146704 i0 39.5 0.518181818181818 38 23 51.8 0 63 176 270 307 MCH2162800.1 hypothetical protein [Phycisphaerales bacterium] diamond 114 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
26878428 26878428 PRJNA1115053_S_NODE_124221_length_237_cov_3.051546_g122404_i0 PRJNA1115053 124221 237 3.051546 7.23216402 Planctomycetota bacterium 2026780 Bacteria Bacteria 41.6 0.0443   NR REJ79784.1 2026780 g122404 i0 46.3 0.518987341772152 41 22 51.9 0 13 135 99 139 REJ79784.1 MAG: YkgJ family cysteine cluster protein [Planctomycetota bacterium] diamond 123 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27004612 27004612 PRJNA1115053_S_NODE_198722_length_194_cov_2.543046_g196905_i0 PRJNA1115053 198722 194 2.543046 4.93350924 Planctomycetia bacterium 2052181 Bacteria Bacteria 41.6 0.0498   NR MDO4571097.1 2052181 g196905 i0 37.5 0.865979381443299 56 34 86.6 1 174 7 190 244 MDO4571097.1 PmoA family protein [Planctomycetia bacterium] diamond 168 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia       Planctomycetia bacterium
27185348 27185348 PRJNA1115053_S_NODE_60822_length_313_cov_3.833333_g59005_i0 PRJNA1115053 60822 313 3.833333 11.99833229 PVC group 1783257 Bacteria Bacteria 43.9 0.03   NR MCC6406572.1 2026780 g59005 i0 41.8 1.53354632587859 67 33 62.3 4 114 308 1 63 MCC6406572.1 hypothetical protein [Planctomycetota bacterium] diamond 480 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28394393 28394393 PRJNA1115053_S_NODE_215306_length_188_cov_0.875862_g213489_i0 PRJNA1115053 215306 188 0.875862 1.64662056 Planctomycetota bacterium 2026780 Bacteria Bacteria 39.3 0.0482   NR HKB15928.1 2026780 g213489 i0 56.3 0.51063829787234 32 13 49.5 1 28 120 10 41 HKB15928.1 hypothetical protein [Planctomycetota bacterium] diamond 96 39.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28710352 28710352 PRJNA1115053_S_NODE_118627_length_242_cov_1.447236_g116810_i0 PRJNA1115053 118627 242 1.447236 3.50231112 Chlamydia trachomatis 813 Bacteria Bacteria 138 4.89e-36   NR CRH84899.1 813 g116810 i0 77.5 1.98347107438017 80 18 99.2 0 241 2 46 125 CRH84899.1 phage prohead protease%2C HK97 family [Chlamydia trachomatis] diamond 480 138 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia trachomatis
29278368 29278368 PRJNA1115053_S_NODE_337129_length_153_cov_0.872727_g335312_i0 PRJNA1115053 337129 153 0.872727 1.33527231 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 41.2 0.0377   NR WP_415910414.1 3398393 g335312 i0 46.2 0.764705882352941 39 21 76.5 0 6 122 224 262 WP_415910414.1 dihydrodipicolinate reductase [Oleiharenicola sp. Vm1] diamond 117 41.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1
29593903 29593903 PRJNA1115053_S_NODE_84310_length_277_cov_2.299145_g82493_i0 PRJNA1115053 84310 277 2.299145 6.36863165 Lentisphaerae bacterium ADurb.Bin242 1852900 Bacteria Bacteria 60.5 2.98e-8   NR OQA87337.1 1852900 g82493 i0 67.4 1.50541516245487 46 15 49.8 0 3 140 347 392 OQA87337.1 MAG: Aspartate aminotransferase [Lentisphaerae bacterium ADurb.Bin242] diamond 417 60.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium ADurb.Bin242
29815168 29815168 PRJNA1115053_S_NODE_164771_length_211_cov_1.142857_g162954_i0 PRJNA1115053 164771 211 1.142857 2.41142827 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.4 0.0346   NR MBN8247304.1 2026799 g162954 i0 51.4 0.497630331753554 35 14 49.8 1 172 68 310 341 MBN8247304.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 105 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29996041 29996041 PRJNA1115053_S_NODE_218211_length_186_cov_3.468531_g216394_i0 PRJNA1115053 218211 186 3.468531 6.45146766 Pseudomonadati 3379134 Bacteria Bacteria 100 8.01e-24   NR MEZ5386606.1 1965333 g216394 i0 67.2 2.95161290322581 61 20 98.4 0 184 2 125 185 MEZ5386606.1 KilA-N domain-containing protein [Prosthecobacter sp.] diamond 549 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30225931 30225931 PRJNA1115053_S_NODE_79852_length_283_cov_1.800000_g78035_i0 PRJNA1115053 79852 283 1.8 5.094 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 43.9 0.0241   NR MEI6032851.1 2499141 g78035 i0 38.1 0.667844522968198 63 30 66.8 2 220 32 744 797 MEI6032851.1 plasma-membrane proton-efflux P-type ATPase [Verrucomicrobiia bacterium] diamond 189 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30478885 30478885 PRJNA1115053_S_NODE_336653_length_153_cov_0.872727_g334836_i0 PRJNA1115053 336653 153 0.872727 1.33527231 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.4 0.0155   NR MEI6341450.1 2026799 g334836 i0 45.8 0.941176470588235 48 24 90.2 1 10 147 427 474 MEI6341450.1 BatD family protein [Verrucomicrobiota bacterium] diamond 144 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30636557 30636557 PRJNA1115053_S_NODE_129413_length_233_cov_2.857895_g127596_i0 PRJNA1115053 129413 233 2.857895 6.65889535 Rhodopirellula sp. 2024855 Bacteria Bacteria 43.1 0.0216   NR MAQ91336.1 2024855 g127596 i0 43.5 0.592274678111588 46 21 52.8 1 189 67 206 251 MAQ91336.1 hypothetical protein [Rhodopirellula sp.] diamond 138 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula Rhodopirellula sp.
30889564 30889564 PRJNA1115053_S_NODE_360574_length_150_cov_0.897196_g358757_i0 PRJNA1115053 360574 150 0.897196 1.345794 Planctomycetota bacterium 2026780 Bacteria Bacteria 42 0.0195   NR MEZ6194240.1 2026780 g358757 i0 48.9 0.94 47 24 94 0 3 143 176 222 MEZ6194240.1 hypothetical protein [Planctomycetota bacterium] diamond 141 42 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31047759 31047759 PRJNA1115053_S_NODE_261215_length_172_cov_1.488372_g259398_i0 PRJNA1115053 261215 172 1.488372 2.55999984 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.00303   NR MDD5436521.1 2035772 g259398 i0 41.7 0.837209302325581 48 24 83.7 1 22 165 274 317 MDD5436521.1 acetyl-CoA decarbonylase/synthase complex subunit gamma [Candidatus Omnitrophota bacterium] diamond 144 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31395364 31395364 PRJNA1115053_S_NODE_291576_length_163_cov_2.400000_g289759_i0 PRJNA1115053 291576 163 2.4 3.912 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 42 0.0228   NR MEZ6058101.1 2026779 g289759 i0 50 0.552147239263804 30 15 55.2 0 63 152 245 274 MEZ6058101.1 formylglycine-generating enzyme family protein [Planctomycetaceae bacterium] diamond 90 42 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
32376035 32376035 PRJNA1115053_S_NODE_206879_length_191_cov_1.459459_g205062_i0 PRJNA1115053 206879 191 1.459459 2.78756669 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.4 0.0261   NR MDG1983274.1 2026780 g205062 i0 42.6 0.848167539267016 54 29 84.8 1 11 172 714 765 MDG1983274.1 PSD1 and planctomycete cytochrome C domain-containing protein [Planctomycetota bacterium] diamond 162 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32439460 32439460 PRJNA1115053_S_NODE_133819_length_230_cov_2.106952_g132002_i0 PRJNA1115053 133819 230 2.106952 4.8459896 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 143 2.11e-40   NR MBQ6330591.1 2212473 g132002 i0 89.5 3.96521739130435 76 8 99.1 0 1 228 134 209 MBQ6330591.1 hypothetical protein [Kiritimatiellia bacterium] diamond 912 143 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32471078 32471078 PRJNA1115053_S_NODE_63119_length_309_cov_2.165414_g61302_i0 PRJNA1115053 63119 309 2.165414 6.69112926 Planctomycetota bacterium 2026780 Bacteria Bacteria 48.5 5.88e-4   NR MEM1329189.1 2026780 g61302 i0 32.9 1.36893203883495 70 47 68 0 305 96 136 205 MEM1329189.1 hypothetical protein [Planctomycetota bacterium] diamond 423 48.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32566046 32566046 PRJNA1115053_S_NODE_200879_length_193_cov_3.520000_g199062_i0 PRJNA1115053 200879 193 3.52 6.7936 Lentisphaeria bacterium 2053569 Bacteria Bacteria 42 0.0359   NR MBQ9502096.1 2053569 g199062 i0 39.6 0.823834196891192 53 30 82.4 1 33 191 476 526 MBQ9502096.1 hypothetical protein [Lentisphaeria bacterium] diamond 159 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32566051 32566051 PRJNA1115053_S_NODE_286259_length_165_cov_1.180328_g284442_i0 PRJNA1115053 286259 165 1.180328 1.9475412 Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 41.2 0.0455   NR PIQ86877.1 1974748 g284442 i0 37.8 0.818181818181818 45 28 81.8 0 149 15 259 303 PIQ86877.1 MAG: hypothetical protein COV74_03330 [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] diamond 135 41.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Abzuiibacterium Candidatus Abzuiibacterium crystallinum
32597361 32597361 PRJNA1115053_S_NODE_210740_length_189_cov_2.630137_g208923_i0 PRJNA1115053 210740 189 2.630137 4.97095893 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.4 0.0243   NR MCC6406572.1 2026780 g208923 i0 43.1 0.920634920634921 58 28 88.9 3 181 14 1 55 MCC6406572.1 hypothetical protein [Planctomycetota bacterium] diamond 174 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;