RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1112809" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1112809 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29783550 29783550 PRJNA1112809_P_NODE_185471_length_243_cov_4.029412_g182196_i0 PRJNA1112809 185471 243 4.029412 9.79147116 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 52.4 1.47e-5   NR MFM2357274.1 2762014 g182196 i0 45.1 1.82716049382716 82 38 97.5 4 241 5 78 155 MFM2357274.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 444 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32534221 32534221 PRJNA1112809_P_NODE_59479_length_474_cov_2.044888_g56207_i0 PRJNA1112809 59479 474 2.044888 9.69276912 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 93.6 8.09e-19   NR MFM2357274.1 2762014 g56207 i0 44.4 1.0126582278481 160 81 98.7 6 469 2 51 206 MFM2357274.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 480 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;