contig_metadata
17 rows where analysis = "diamond", bioproject = "PRJNA1112809" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12973091 | 12973091 | PRJNA1112809_P_NODE_137051_length_277_cov_1.019608_g133776_i0 | PRJNA1112809 | 137051 | 277 | 1.019608 | 2.82431416 | Petrotogaceae bacterium | 2819251 | Bacteria | Bacteria | 73.9 | 1.37e-14 | NR | MBP7237489.1 | 2819251 | g133776 | i0 | 87.8 | 0.444043321299639 | 41 | 5 | 44.4 | 0 | 156 | 34 | 1 | 41 | MBP7237489.1 PRD domain-containing protein [Petrotogaceae bacterium] | diamond | 123 | 73.9 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Petrotogales | Petrotogaceae | Petrotogaceae bacterium | |||
| 15521761 | 15521761 | PRJNA1112809_P_NODE_129633_length_285_cov_1.250000_g126358_i0 | PRJNA1112809 | 129633 | 285 | 1.25 | 3.5625 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 171 | 2.65e-50 | NR | HNR00700.1 | 2026798 | g126358 | i0 | 87.2 | 1.97894736842105 | 94 | 12 | 98.9 | 0 | 2 | 283 | 132 | 225 | HNR00700.1 cystathionine gamma-lyase [Trueperaceae bacterium] | diamond | 564 | 171 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 16325871 | 16325871 | PRJNA1112809_P_NODE_168233_length_250_cov_0.870056_g164958_i0 | PRJNA1112809 | 168233 | 250 | 0.870056 | 2.17514 | Deinococcus yunweiensis | 367282 | Bacteria | Bacteria | 137 | 3.66e-36 | NR | WP_412027026.1 | 367282 | g164958 | i0 | 69.8 | 1.152 | 96 | 15 | 98.4 | 2 | 3 | 248 | 253 | 348 | WP_412027026.1 hypothetical protein [Deinococcus yunweiensis] | diamond | 288 | 137 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yunweiensis | ||
| 26972847 | 26972847 | PRJNA1112809_P_NODE_106142_length_319_cov_1.878049_g102867_i0 | PRJNA1112809 | 106142 | 319 | 1.878049 | 5.99097631 | Thermotogota bacterium | 2053689 | Bacteria | Bacteria | 86.3 | 2.09e-17 | NR | RKX40512.1 | 2053689 | g102867 | i0 | 74.5 | 2.40752351097179 | 51 | 13 | 48 | 0 | 154 | 2 | 1 | 51 | RKX40512.1 MAG: L-erythro-3,5-diaminohexanoate dehydrogenase [Thermotogota bacterium] | diamond | 768 | 86.3 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogota bacterium | ||||||
| 27004565 | 27004565 | PRJNA1112809_P_NODE_80462_length_381_cov_2.344156_g77187_i0 | PRJNA1112809 | 80462 | 381 | 2.344156 | 8.93123436 | Deinococcales bacterium | 2478479 | Bacteria | Bacteria | 156 | 9.13e-45 | NR | HWG84700.1 | 2478479 | g77187 | i0 | 62.7 | 0.992125984251969 | 126 | 47 | 99.2 | 0 | 2 | 379 | 78 | 203 | HWG84700.1 amino acid ABC transporter permease [Deinococcales bacterium] | diamond | 378 | 156 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcales bacterium | ||||
| 27731565 | 27731565 | PRJNA1112809_P_NODE_128744_length_286_cov_1.291080_g125469_i0 | PRJNA1112809 | 128744 | 286 | 1.29108 | 3.6924888 | Deinococcus aquatilis | 519440 | Bacteria | Bacteria | 134 | 5.46e-39 | NR | WP_083922326.1 | 519440 | g125469 | i0 | 97.6 | 0.891608391608392 | 85 | 2 | 89.2 | 0 | 269 | 15 | 1 | 85 | WP_083922326.1 PAAR domain-containing protein [Deinococcus aquatilis] | diamond | 255 | 134 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquatilis | ||
| 28362617 | 28362617 | PRJNA1112809_P_NODE_147246_length_266_cov_1.595855_g143971_i0 | PRJNA1112809 | 147246 | 266 | 1.595855 | 4.2449743 | Fervidobacterium sp. | 1871331 | Bacteria | Bacteria | 169 | 2.04e-48 | NR | MDM7321098.1 | 1871331 | g143971 | i0 | 96.6 | 0.992481203007519 | 88 | 3 | 99.2 | 0 | 2 | 265 | 17 | 104 | MDM7321098.1 VWA-like domain-containing protein [Fervidobacterium sp.] | diamond | 264 | 169 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium sp. | ||
| 28489133 | 28489133 | PRJNA1112809_P_NODE_182587_length_245_cov_0.872093_g179312_i0 | PRJNA1112809 | 182587 | 245 | 0.872093 | 2.13662785 | Deinococcus sp. Arct2-2 | 2568653 | Bacteria | Bacteria | 77.4 | 2.18e-14 | NR | WP_136365014.1 | 2568653 | g179312 | i0 | 87.2 | 1.88571428571429 | 39 | 5 | 47.8 | 0 | 129 | 245 | 259 | 297 | WP_136365014.1 transposase [Deinococcus sp. Arct2-2] | diamond | 462 | 77.4 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. Arct2-2 | ||
| 29373184 | 29373184 | PRJNA1112809_P_NODE_186269_length_243_cov_1.452941_g182994_i0 | PRJNA1112809 | 186269 | 243 | 1.452941 | 3.53064663 | Deinococcus fonticola | 2528713 | Bacteria | Bacteria | 60.5 | 2.07e-8 | NR | WP_135230627.1 | 2528713 | g182994 | i0 | 87.5 | 0.395061728395062 | 32 | 4 | 39.5 | 0 | 1 | 96 | 376 | 407 | WP_135230627.1 hypothetical protein [Deinococcus fonticola] | diamond | 96 | 60.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus fonticola | ||
| 29783495 | 29783495 | PRJNA1112809_P_NODE_120031_length_297_cov_1.375000_g116756_i0 | PRJNA1112809 | 120031 | 297 | 1.375 | 4.08375 | Deinococcus yavapaiensis | 309889 | Bacteria | Bacteria | 139 | 1.08e-39 | NR | WP_110886926.1 | 309889 | g116756 | i0 | 75 | 0.848484848484849 | 84 | 21 | 84.8 | 0 | 43 | 294 | 12 | 95 | WP_110886926.1 DUF427 domain-containing protein [Deinococcus yavapaiensis] | diamond | 252 | 139 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yavapaiensis | ||
| 30564263 | 30564263 | PRJNA1112809_P_NODE_191973_length_241_cov_1.672619_g188698_i0 | PRJNA1112809 | 191973 | 241 | 1.672619 | 4.03101179 | Bacteria | 2 | Bacteria | Bacteria | 53.9 | 4.07e-6 | NR | WP_347241448.1 | 275 | g188698 | i0 | 52.4 | 2.51452282157676 | 42 | 20 | 52.3 | 0 | 241 | 116 | 363 | 404 | WP_347241448.1 glycosyltransferase family 4 protein [Thermus sp.] | diamond | 606 | 53.9 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. | ||
| 30627563 | 30627563 | PRJNA1112809_P_NODE_124893_length_290_cov_1.958525_g121618_i0 | PRJNA1112809 | 124893 | 290 | 1.958525 | 5.6797225 | Bacteria | 2 | Bacteria | Bacteria | 47.8 | 0.00111 | NR | WP_170131105.1 | 309889 | g121618 | i0 | 38.4 | 2.80344827586207 | 86 | 52 | 89 | 1 | 260 | 3 | 83 | 167 | WP_170131105.1 hypothetical protein [Deinococcus yavapaiensis] | diamond | 813 | 47.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yavapaiensis | ||
| 30763085 | 30763085 | PRJNA1112809_P_NODE_161294_length_253_cov_1.511111_g158019_i0 | PRJNA1112809 | 161294 | 253 | 1.511111 | 3.82311083 | Fervidobacterium sp. | 1871331 | Bacteria | Bacteria | 163 | 7.96e-45 | NR | HOH53832.1 | 1871331 | g158019 | i0 | 97.6 | 2.95256916996047 | 83 | 2 | 98.4 | 0 | 3 | 251 | 248 | 330 | HOH53832.1 preprotein translocase subunit SecA [Fervidobacterium sp.] | diamond | 747 | 163 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium sp. | ||
| 30763113 | 30763113 | PRJNA1112809_P_NODE_52434_length_522_cov_1.977728_g49169_i0 | PRJNA1112809 | 52434 | 522 | 1.977728 | 10.32374016 | Deinococcus apachensis | 309886 | Bacteria | Bacteria | 112 | 1.9899999999999999e-25 | NR | WP_019584686.1 | 309886 | g49169 | i0 | 57.6 | 1.1551724137931 | 92 | 39 | 52.9 | 0 | 26 | 301 | 384 | 475 | WP_019584686.1 hypothetical protein [Deinococcus apachensis] | diamond | 603 | 112 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus apachensis | ||
| 31512955 | 31512955 | PRJNA1112809_P_NODE_184936_length_244_cov_0.900585_g181661_i0 | PRJNA1112809 | 184936 | 244 | 0.900585 | 2.1974274 | Deinococcus | 1298 | Bacteria | Bacteria | 63.5 | 2.19e-10 | NR | WP_041221842.1 | 68909 | g181661 | i0 | 91.4 | 0.885245901639344 | 35 | 3 | 43 | 0 | 138 | 242 | 3 | 37 | WP_041221842.1 hypothetical protein [Deinococcus geothermalis] | diamond | 216 | 63.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 32848967 | 32848967 | PRJNA1112809_P_NODE_145100_length_268_cov_1.938462_g141825_i0 | PRJNA1112809 | 145100 | 268 | 1.938462 | 5.1950781599999996 | Deinococcota bacterium | 1913990 | Bacteria | Bacteria | 77.4 | 3.08e-14 | NR | MEY4531830.1 | 1913990 | g141825 | i0 | 47.7 | 1.97014925373134 | 88 | 45 | 98.5 | 1 | 267 | 4 | 144 | 230 | MEY4531830.1 undecaprenyl-phosphate galactose phosphotransferase WbaP [Deinococcota bacterium] | diamond | 528 | 77.4 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococcota bacterium | ||||||
| 32903059 | 32903059 | PRJNA1112809_P_NODE_183000_length_244_cov_1.994152_g179725_i0 | PRJNA1112809 | 183000 | 244 | 1.994152 | 4.86573088 | Deinococcus | 1298 | Bacteria | Bacteria | 66.2 | 1.12e-11 | NR | WP_224607214.1 | 1656887 | g179725 | i0 | 55.1 | 1.20491803278689 | 49 | 22 | 60.2 | 0 | 159 | 13 | 6 | 54 | WP_224607214.1 ACT domain-containing protein [Deinococcus multiflagellatus] | diamond | 294 | 66.2 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus multiflagellatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;