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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1112809" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 7 ✖

bioproject 1

  • PRJNA1112809 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12973473 12973473 PRJNA1112809_P_NODE_156651_length_257_cov_1.929348_g153376_i0 PRJNA1112809 156651 257 1.929348 4.95842436 Methanobacterium sp. PtaU1.Bin 2164 Archaea Archaea 168 3.84e-46   NR OPY20153.1 1811675 g153376 i0 98.8 0.992217898832685 85 1 99.2 0 255 1 494 578 OPY20153.1 MAG: cobaltochelatase subunit CobN [Methanobacterium sp. PtaU1.Bin097] diamond 255 168 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. PtaU1.Bin097
21897041 21897041 PRJNA1112809_P_NODE_191918_length_241_cov_1.761905_g188643_i0 PRJNA1112809 191918 241 1.761905 4.24619105 Methanobacterium 2160 Archaea Archaea 139 1e-36   NR HEX7467179.1 2164 g188643 i0 93.8 2.9253112033195 80 5 99.6 0 241 2 12 91 HEX7467179.1 MFS transporter [Methanobacterium sp.] diamond 705 140 0.992857142857143 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
27596293 27596293 PRJNA1112809_P_NODE_67964_length_429_cov_2.342697_g64690_i0 PRJNA1112809 67964 429 2.342697 10.05017013 root 1 Root_unresolved Root_unresolved 60.5 1.92e-7   NR MEN6553436.1 2164 g64690 i0 58.1 0.594405594405594 43 18 30.1 0 417 289 907 949 MEN6553436.1 AAA family ATPase [Methanobacterium sp.] diamond 255 60.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
29341685 29341685 PRJNA1112809_P_NODE_196789_length_234_cov_2.496894_g193514_i0 PRJNA1112809 196789 234 2.496894 5.84273196 Methanobacteriaceae archaeon 2099680 Archaea Archaea 161 3.789999999999999e-48   NR NYB26408.1 2099680 g193514 i0 100 0.987179487179487 77 0 98.7 0 3 233 87 163 NYB26408.1 metallophosphoesterase family protein [Methanobacteriaceae archaeon] diamond 231 161 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
31458540 31458540 PRJNA1112809_P_NODE_181156_length_245_cov_0.895349_g177881_i0 PRJNA1112809 181156 245 0.895349 2.19360505 Methanobacteriaceae archaeon 2099680 Archaea Archaea 157 3.72e-43   NR NYB27069.1 2099680 g177881 i0 97.5 0.991836734693878 81 2 99.2 0 1 243 480 560 NYB27069.1 DUF128 domain-containing protein [Methanobacteriaceae archaeon] diamond 243 157 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
31521786 31521786 PRJNA1112809_P_NODE_182116_length_245_cov_0.895349_g178841_i0 PRJNA1112809 182116 245 0.895349 2.19360505 Methanobrevibacter sp. 66852 Archaea Archaea 118 1.1000000000000002e-28   NR MBO7691940.1 66852 g178841 i0 66.7 1.98367346938776 81 27 99.2 0 3 245 384 464 MBO7691940.1 DNA polymerase III subunit alpha [Methanobrevibacter sp.] diamond 486 118 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32565934 32565934 PRJNA1112809_P_NODE_181139_length_245_cov_0.895349_g177864_i0 PRJNA1112809 181139 245 0.895349 2.19360505 Methanobacteriaceae archaeon 2099680 Archaea Archaea 162 4.74e-49   NR NYB25710.1 2099680 g177864 i0 98.8 0.991836734693878 81 1 99.2 0 3 245 22 102 NYB25710.1 TetR/AcrR family transcriptional regulator [Methanobacteriaceae archaeon] diamond 243 162 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;