RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1111448" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111448 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14246856 14246856 PRJNA1111448_S_NODE_40052_length_374_cov_1.451827_g39229_i0 PRJNA1111448 40052 374 1.451827 5.42983298 Octopus bimaculoides 37653 Mollusca Mollusca 136 6.31e-38   NR XP_014786476.1 37653 g39229 i0 61.6 1.79679144385027 112 41 89.8 1 5 340 65 174 XP_014786476.1 60S ribosomal protein L17 isoform X2 [Octopus bimaculoides] diamond 672 136 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
26592793 26592793 PRJNA1111448_S_NODE_104581_length_266_cov_4.227979_g103758_i0 PRJNA1111448 104581 266 4.227979 11.24642414 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0183   NR XP_067657806.1 109174 g103758 i0 35.4 2.18796992481203 65 36 72.2 2 63 254 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 582 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
27352545 27352545 PRJNA1111448_S_NODE_77923_length_299_cov_1.008850_g77100_i0 PRJNA1111448 77923 299 1.00885 3.0164615 Gigantopelta aegis 1735272 Mollusca Mollusca 54.7 4.25e-6   NR XP_041364336.1 1735272 g77100 i0 43.9 2.438127090301 82 42 80.3 2 244 5 259 338 XP_041364336.1 uncharacterized protein LOC121379753 [Gigantopelta aegis] diamond 729 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
28922095 28922095 PRJNA1111448_S_NODE_68588_length_313_cov_1.125000_g67765_i0 PRJNA1111448 68588 313 1.125 3.52125 Metazoa 33208 Mollusca Mollusca 77.8 4.34e-14   NR XP_014776172.1 37653 g67765 i0 37.5 5.00319488817891 104 59 99.7 2 2 313 387 484 XP_014776172.1 protein strawberry notch homolog 1 [Octopus bimaculoides] diamond 1566 77.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
30027569 30027569 PRJNA1111448_S_NODE_144511_length_197_cov_8.790323_g143688_i0 PRJNA1111448 144511 197 8.790323 17.31693631 root 1 Root_unresolved Root_unresolved 98.6 1.8899999999999994e-23   NR CAG2192087.1 6550 g143688 i0 100 188.680203045685 49 0 74.6 0 195 49 193 241 CAG2192087.1 RP-S14e [Mytilus edulis] diamond 37170 98.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
30478678 30478678 PRJNA1111448_S_NODE_113613_length_257_cov_1.940217_g112790_i0 PRJNA1111448 113613 257 1.940217 4.98635769 Mytilus galloprovincialis 29158 Mollusca Mollusca 53.5 6.33e-6   NR VDI39259.1 29158 g112790 i0 41.7 5.88326848249027 72 41 84 1 5 220 90 160 VDI39259.1 Hypothetical predicted protein [Mytilus galloprovincialis] diamond 1512 53.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus galloprovincialis
30763029 30763029 PRJNA1111448_S_NODE_124414_length_249_cov_0.875000_g123591_i0 PRJNA1111448 124414 249 0.875 2.17875 Haliotis rufescens 6454 Mollusca Mollusca 50.4 7.42e-5   NR XP_046363039.1 6454 g123591 i0 77.8 2.04819277108434 27 6 32.5 0 244 164 439 465 XP_046363039.1 V-type proton ATPase subunit H-like isoform X2 [Haliotis rufescens] diamond 510 50.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;