RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1111448" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1111448 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30384190 30384190 PRJNA1111448_S_NODE_23353_length_444_cov_1.940701_g22531_i0 PRJNA1111448 23353 444 1.940701 8.61671244 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 59.7 4.04e-7   NR UNY42093.1 3003959 g22531 i0 66.7 0.263513513513513 39 13 26.4 0 327 443 25 63 UNY42093.1 MAG: polyprotein 1 [Picornavirales sp.] diamond 117 59.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30668126 30668126 PRJNA1111448_S_NODE_96213_length_276_cov_1.137931_g95390_i0 PRJNA1111448 96213 276 1.137931 3.14068956 Vallisneria spiralis virus 1 3351449 Viruses Viruses 143 6.439999999999998e-41   NR DBA60344.1 3351449 g95390 i0 88.6 0.858695652173913 79 9 85.9 0 276 40 131 209 DBA60344.1 TPA_asm: coat protein [Vallisneria spiralis virus 1] diamond 237 143 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Tepovirus Vallisneria spiralis virus 1
32691427 32691427 PRJNA1111448_S_NODE_73040_length_306_cov_0.991416_g72217_i0 PRJNA1111448 73040 306 0.991416 3.03373296 Picornaviridae sp. 1530251 Viruses Viruses 180 2.05e-51   NR URG14993.1 1530251 g72217 i0 78.4 1 102 22 100 0 1 306 34 135 URG14993.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 306 180 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;