contig_metadata
39 rows where analysis = "diamond", bioproject = "PRJNA1111146" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26624598 | 26624598 | PRJNA1111146_P_NODE_64621_length_270_cov_1.589862_g63483_i0 | PRJNA1111146 | 64621 | 270 | 1.589862 | 4.2926274 | Helicobacter pylori | 210 | Bacteria | Bacteria | 59.3 | 1.05e-9 | NR | GAA8757316.1 | 210 | g63483 | i0 | 71.4 | 0.8 | 35 | 10 | 38.9 | 0 | 264 | 160 | 5 | 39 | GAA8757316.1 hypothetical protein Kyoto147A_3750 [Helicobacter pylori] | diamond | 216 | 59.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26878229 | 26878229 | PRJNA1111146_P_NODE_307181_length_185_cov_2.636364_g306043_i0 | PRJNA1111146 | 307181 | 185 | 2.636364 | 4.8772734 | Helicobacter pylori | 210 | Bacteria | Bacteria | 73.2 | 2.33e-15 | NR | GAA8854446.1 | 210 | g306043 | i0 | 75.5 | 0.794594594594595 | 49 | 12 | 79.5 | 0 | 10 | 156 | 22 | 70 | GAA8854446.1 hypothetical protein Kyoto154A_1380 [Helicobacter pylori] | diamond | 147 | 73.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26941115 | 26941115 | PRJNA1111146_P_NODE_290002_length_189_cov_1.205882_g288864_i0 | PRJNA1111146 | 290002 | 189 | 1.205882 | 2.27911698 | Helicobacter pylori | 210 | Bacteria | Bacteria | 62.4 | 4.47e-11 | NR | GAA9131729.1 | 210 | g288864 | i0 | 74.4 | 1.23809523809524 | 39 | 8 | 61.9 | 2 | 29 | 145 | 1 | 37 | GAA9131729.1 hypothetical protein Kyoto190A_2250 [Helicobacter pylori] | diamond | 234 | 62.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27320735 | 27320735 | PRJNA1111146_P_NODE_187783_length_209_cov_1.089744_g186645_i0 | PRJNA1111146 | 187783 | 209 | 1.089744 | 2.27756496 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.1 | 3.53e-8 | NR | GAA6859275.1 | 210 | g186645 | i0 | 45.7 | 3.86124401913876 | 70 | 22 | 99 | 3 | 3 | 209 | 1 | 55 | GAA6859275.1 hypothetical protein Kyoto206A_0900 [Helicobacter pylori] | diamond | 807 | 55.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27478578 | 27478578 | PRJNA1111146_P_NODE_101843_length_242_cov_1.560847_g100705_i0 | PRJNA1111146 | 101843 | 242 | 1.560847 | 3.77724974 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 7.72e-6 | NR | GAA8870591.1 | 210 | g100705 | i0 | 62.5 | 0.979338842975207 | 40 | 14 | 48.3 | 1 | 10 | 126 | 6 | 45 | GAA8870591.1 hypothetical protein Kyoto154A_3680 [Helicobacter pylori] | diamond | 237 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27510312 | 27510312 | PRJNA1111146_P_NODE_409743_length_178_cov_1.808000_g408605_i0 | PRJNA1111146 | 409743 | 178 | 1.808 | 3.21824 | Helicobacter pylori | 210 | Bacteria | Bacteria | 69.7 | 2.97e-14 | NR | GAA8812112.1 | 210 | g408605 | i0 | 78 | 0.691011235955056 | 41 | 9 | 69.1 | 0 | 174 | 52 | 6 | 46 | GAA8812112.1 hypothetical protein Kyoto149A_3190 [Helicobacter pylori] | diamond | 123 | 69.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27541791 | 27541791 | PRJNA1111146_P_NODE_21584_length_363_cov_1.532258_g20447_i0 | PRJNA1111146 | 21584 | 363 | 1.532258 | 5.56209654 | Campylobacter concisus | 199 | Bacteria | Bacteria | 45.1 | 0.0233 | NR | MBS6286284.1 | 199 | g20447 | i0 | 35 | 0.495867768595041 | 60 | 38 | 48.8 | 1 | 201 | 25 | 221 | 280 | MBS6286284.1 hypothetical protein [Campylobacter concisus] | diamond | 180 | 45.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 27659476 | 27659476 | PRJNA1111146_P_NODE_106944_length_239_cov_2.935484_g105806_i0 | PRJNA1111146 | 106944 | 239 | 2.935484 | 7.01580676 | Campylobacter | 194 | Bacteria | Bacteria | 56.2 | 4.64e-7 | NR | WP_169940248.1 | 1705724 | g105806 | i0 | 66.7 | 0.903765690376569 | 36 | 12 | 45.2 | 0 | 132 | 239 | 65 | 100 | WP_169940248.1 alpha/beta hydrolase [Campylobacter sp. RM15925] | diamond | 216 | 56.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM15925 | ||
| 27826008 | 27826008 | PRJNA1111146_P_NODE_11424_length_461_cov_1.183824_g10295_i0 | PRJNA1111146 | 11424 | 461 | 1.183824 | 5.45742864 | Helicobacter pylori | 210 | Bacteria | Bacteria | 44.7 | 0.00696 | NR | GAA8718463.1 | 210 | g10295 | i0 | 89.5 | 0.123644251626898 | 19 | 2 | 12.4 | 0 | 449 | 393 | 1 | 19 | GAA8718463.1 hypothetical protein Kyoto145A_4490 [Helicobacter pylori] | diamond | 57 | 44.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27857435 | 27857435 | PRJNA1111146_P_NODE_329705_length_183_cov_2.684615_g328567_i0 | PRJNA1111146 | 329705 | 183 | 2.684615 | 4.91284545 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.4 | 5.14e-5 | NR | GAA8871241.1 | 210 | g328567 | i0 | 91.2 | 0.557377049180328 | 34 | 3 | 55.7 | 0 | 133 | 32 | 1 | 34 | GAA8871241.1 hypothetical protein Kyoto154A_3730 [Helicobacter pylori] | diamond | 102 | 47.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27888946 | 27888946 | PRJNA1111146_P_NODE_290185_length_189_cov_1.095588_g289047_i0 | PRJNA1111146 | 290185 | 189 | 1.095588 | 2.07066132 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40 | 0.034 | NR | GAA6820949.1 | 210 | g289047 | i0 | 44.7 | 0.746031746031746 | 47 | 16 | 74.6 | 1 | 141 | 1 | 4 | 40 | GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori] | diamond | 141 | 40 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28101189 | 28101189 | PRJNA1111146_P_NODE_48365_length_290_cov_2.751055_g47228_i0 | PRJNA1111146 | 48365 | 290 | 2.751055 | 7.9780595 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 71.2 | 5.44e-12 | NR | WP_040126338.1 | 196 | g47228 | i0 | 61.7 | 2.23448275862069 | 60 | 22 | 61 | 1 | 60 | 236 | 335 | 394 | WP_040126338.1 type IV secretion system protein VirB10 [Campylobacter fetus] | diamond | 648 | 71.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter fetus | ||
| 28101190 | 28101190 | PRJNA1111146_P_NODE_7845_length_559_cov_4.377470_g6735_i0 | PRJNA1111146 | 7845 | 559 | 4.37747 | 24.4700573 | Bacteria | 2 | Bacteria | Bacteria | 59.7 | 6.73e-8 | NR | MDU9799813.1 | 210 | g6735 | i0 | 86.7 | 0.483005366726297 | 30 | 4 | 16.1 | 0 | 53 | 142 | 8 | 37 | MDU9799813.1 hypothetical protein [Helicobacter pylori] | diamond | 270 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28109963 | 28109963 | PRJNA1111146_P_NODE_386705_length_180_cov_0.889764_g385567_i0 | PRJNA1111146 | 386705 | 180 | 0.889764 | 1.6015752 | Poseidonibacter antarcticus | 2478538 | Bacteria | Bacteria | 72.4 | 1.25e-13 | NR | WP_162984614.1 | 2478538 | g385567 | i0 | 60.3 | 0.966666666666667 | 58 | 23 | 96.7 | 0 | 179 | 6 | 74 | 131 | WP_162984614.1 GAG-pre-integrase domain-containing protein, partial [Poseidonibacter antarcticus] | diamond | 174 | 72.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Poseidonibacter | Poseidonibacter antarcticus | ||
| 28164500 | 28164500 | PRJNA1111146_P_NODE_152425_length_220_cov_1.023952_g151287_i0 | PRJNA1111146 | 152425 | 220 | 1.023952 | 2.2526944 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 94.7 | 6.63e-23 | NR | CAA6822506.1 | 269237 | g151287 | i0 | 66.7 | 13.8545454545455 | 63 | 21 | 85.9 | 0 | 32 | 220 | 25 | 87 | CAA6822506.1 MAG: Rare lipoprotein A precursor [uncultured Sulfurovum sp.] | diamond | 3048 | 95.5 | 0.991623036649215 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | uncultured Sulfurovum sp. | ||
| 28227335 | 28227335 | PRJNA1111146_P_NODE_247806_length_197_cov_1.166667_g246668_i0 | PRJNA1111146 | 247806 | 197 | 1.166667 | 2.29833399 | Bacteria | 2 | Bacteria | Bacteria | 131 | 1.9599999999999997e-37 | NR | ELV3177625.1 | 197 | g246668 | i0 | 96.9 | 4.9492385786802 | 65 | 2 | 99 | 0 | 3 | 197 | 52 | 116 | ELV3177625.1 IS3 family transposase [Campylobacter jejuni] | diamond | 975 | 131 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 28331055 | 28331055 | PRJNA1111146_P_NODE_441706_length_175_cov_2.713115_g440568_i0 | PRJNA1111146 | 441706 | 175 | 2.713115 | 4.74795125 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 1.02e-5 | NR | GAA6912895.1 | 210 | g440568 | i0 | 82.1 | 0.48 | 28 | 5 | 48 | 0 | 9 | 92 | 36 | 63 | GAA6912895.1 hypothetical protein Kyoto207A_3080 [Helicobacter pylori] | diamond | 84 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28457542 | 28457542 | PRJNA1111146_P_NODE_282826_length_190_cov_1.401460_g281688_i0 | PRJNA1111146 | 282826 | 190 | 1.40146 | 2.662774 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.1 | 1.72e-11 | NR | GAA9038720.1 | 210 | g281688 | i0 | 69.6 | 2.02105263157895 | 46 | 8 | 63.2 | 1 | 172 | 53 | 4 | 49 | GAA9038720.1 hypothetical protein Kyoto184A_01370 [Helicobacter pylori] | diamond | 384 | 65.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28646984 | 28646984 | PRJNA1111146_P_NODE_89647_length_249_cov_2.505102_g88509_i0 | PRJNA1111146 | 89647 | 249 | 2.505102 | 6.23770398 | Helicobacter pylori | 210 | Bacteria | Bacteria | 59.7 | 9.13e-10 | NR | GAA9125269.1 | 210 | g88509 | i0 | 69.4 | 1.71084337349398 | 36 | 10 | 43.4 | 1 | 162 | 55 | 1 | 35 | GAA9125269.1 hypothetical protein Kyoto190A_0810 [Helicobacter pylori] | diamond | 426 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29026056 | 29026056 | PRJNA1111146_P_NODE_338748_length_183_cov_0.876923_g337610_i0 | PRJNA1111146 | 338748 | 183 | 0.876923 | 1.60476909 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 86.7 | 5.84e-18 | NR | WP_311337355.1 | 827 | g337610 | i0 | 65.6 | 3 | 61 | 16 | 100 | 1 | 183 | 1 | 201 | 256 | WP_311337355.1 YadA-like family protein [Campylobacter ureolyticus] | diamond | 549 | 86.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 29088969 | 29088969 | PRJNA1111146_P_NODE_399008_length_179_cov_0.904762_g397870_i0 | PRJNA1111146 | 399008 | 179 | 0.904762 | 1.61952398 | Helicobacter pylori | 210 | Bacteria | Bacteria | 41.6 | 0.0125 | NR | GAA6955505.1 | 210 | g397870 | i0 | 46.2 | 0.653631284916201 | 39 | 20 | 63.7 | 1 | 23 | 136 | 1 | 39 | GAA6955505.1 hypothetical protein Kyoto211A_1640 [Helicobacter pylori] | diamond | 117 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29152380 | 29152380 | PRJNA1111146_P_NODE_279589_length_190_cov_12.138686_g278451_i0 | PRJNA1111146 | 279589 | 190 | 12.138686 | 23.0635034 | Helicobacter pylori | 210 | Bacteria | Bacteria | 41.6 | 0.0054 | NR | GAA8777965.1 | 210 | g278451 | i0 | 94.4 | 0.284210526315789 | 18 | 1 | 28.4 | 0 | 118 | 171 | 1 | 18 | GAA8777965.1 hypothetical protein BTM122_15620 [Helicobacter pylori] | diamond | 54 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29278152 | 29278152 | PRJNA1111146_P_NODE_162549_length_216_cov_1.711656_g161411_i0 | PRJNA1111146 | 162549 | 216 | 1.711656 | 3.69717696 | Campylobacter sp. 2 | 205 | Bacteria | Bacteria | 92.8 | 5.2e-22 | NR | WP_214120692.1 | 2836735 | g161411 | i0 | 73.5 | 1.76388888888889 | 68 | 6 | 77.8 | 1 | 212 | 45 | 40 | 107 | WP_214120692.1 hypothetical protein, partial [Campylobacter sp. 2018MI01] | diamond | 381 | 92.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. 2018MI01 | ||
| 29467433 | 29467433 | PRJNA1111146_P_NODE_401710_length_179_cov_0.904762_g400572_i0 | PRJNA1111146 | 401710 | 179 | 0.904762 | 1.61952398 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 107 | 3.57e-26 | NR | EOJ1652682.1 | 197 | g400572 | i0 | 83.1 | 0.988826815642458 | 59 | 10 | 98.9 | 0 | 2 | 178 | 44 | 102 | EOJ1652682.1 hypothetical protein [Campylobacter jejuni] | diamond | 177 | 107 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 29593690 | 29593690 | PRJNA1111146_P_NODE_39130_length_307_cov_1.031496_g37993_i0 | PRJNA1111146 | 39130 | 307 | 1.031496 | 3.16669272 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.0151 | NR | GAA8930966.1 | 210 | g37993 | i0 | 39 | 0.576547231270358 | 59 | 11 | 47.9 | 2 | 204 | 58 | 2 | 45 | GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori] | diamond | 177 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29720090 | 29720090 | PRJNA1111146_P_NODE_11250_length_464_cov_0.946472_g10121_i0 | PRJNA1111146 | 11250 | 464 | 0.946472 | 4.39163008 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 5.69e-5 | NR | GAA8955046.1 | 210 | g10121 | i0 | 65.9 | 0.523706896551724 | 41 | 11 | 24.6 | 2 | 338 | 451 | 2 | 42 | GAA8955046.1 hypothetical protein Kyoto181A_2800 [Helicobacter pylori] | diamond | 243 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29973040 | 29973040 | PRJNA1111146_P_NODE_437191_length_177_cov_0.911290_g436053_i0 | PRJNA1111146 | 437191 | 177 | 0.91129 | 1.6129833 | Campylobacter | 194 | Bacteria | Bacteria | 84.7 | 5.47e-20 | NR | WP_025803834.1 | 194 | g436053 | i0 | 100 | 0.796610169491525 | 47 | 0 | 79.7 | 0 | 35 | 175 | 1 | 47 | WP_025803834.1 MULTISPECIES: hypothetical protein [Campylobacter] | diamond | 141 | 84.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 30532909 | 30532909 | PRJNA1111146_P_NODE_172293_length_213_cov_1.131250_g171155_i0 | PRJNA1111146 | 172293 | 213 | 1.13125 | 2.4095625 | root | 1 | Root_unresolved | Root_unresolved | 104 | 4.71e-26 | NR | WP_265610816.1 | 197 | g171155 | i0 | 77.1 | 172.225352112676 | 70 | 16 | 98.6 | 0 | 2 | 211 | 11 | 80 | WP_265610816.1 class A beta-lactamase, partial [Campylobacter jejuni] | diamond | 36684 | 104 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 31354671 | 31354671 | PRJNA1111146_P_NODE_145336_length_223_cov_0.800000_g144198_i0 | PRJNA1111146 | 145336 | 223 | 0.8 | 1.784 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.7 | 6.44e-12 | NR | GAA6859275.1 | 210 | g144198 | i0 | 48.6 | 2.01793721973094 | 70 | 20 | 94.2 | 1 | 221 | 12 | 6 | 59 | GAA6859275.1 hypothetical protein Kyoto206A_0900 [Helicobacter pylori] | diamond | 450 | 65.1 | 0.993855606758833 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31616407 | 31616407 | PRJNA1111146_P_NODE_408396_length_178_cov_2.288000_g407258_i0 | PRJNA1111146 | 408396 | 178 | 2.288 | 4.07264 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.9 | 1.69e-7 | NR | GAA6912895.1 | 210 | g407258 | i0 | 73.2 | 0.691011235955056 | 41 | 11 | 69.1 | 0 | 2 | 124 | 2 | 42 | GAA6912895.1 hypothetical protein Kyoto207A_3080 [Helicobacter pylori] | diamond | 123 | 53.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31774465 | 31774465 | PRJNA1111146_P_NODE_41197_length_303_cov_0.772000_g40060_i0 | PRJNA1111146 | 41197 | 303 | 0.772 | 2.33916 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 8.72e-5 | NR | GAA9130370.1 | 210 | g40060 | i0 | 87.5 | 0.514851485148515 | 24 | 3 | 23.8 | 0 | 301 | 230 | 13 | 36 | GAA9130370.1 hypothetical protein Kyoto190A_1980 [Helicobacter pylori] | diamond | 156 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31806228 | 31806228 | PRJNA1111146_P_NODE_441817_length_175_cov_2.508197_g440679_i0 | PRJNA1111146 | 441817 | 175 | 2.508197 | 4.38934475 | Helicobacter pylori | 210 | Bacteria | Bacteria | 39.7 | 0.0227 | NR | GAA9196539.1 | 210 | g440679 | i0 | 60 | 0.514285714285714 | 30 | 11 | 49.7 | 1 | 44 | 130 | 3 | 32 | GAA9196539.1 hypothetical protein Kyoto193A_4290 [Helicobacter pylori] | diamond | 90 | 39.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31901112 | 31901112 | PRJNA1111146_P_NODE_436917_length_177_cov_0.911290_g435779_i0 | PRJNA1111146 | 436917 | 177 | 0.91129 | 1.6129833 | Helicobacter pylori | 210 | Bacteria | Bacteria | 111 | 8.28e-27 | NR | GAA8852321.1 | 210 | g435779 | i0 | 84.2 | 0.966101694915254 | 57 | 9 | 96.6 | 0 | 5 | 175 | 1083 | 1139 | GAA8852321.1 hypothetical protein DUHN55_40530 [Helicobacter pylori] | diamond | 171 | 111 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32090982 | 32090982 | PRJNA1111146_P_NODE_310398_length_185_cov_1.416667_g309260_i0 | PRJNA1111146 | 310398 | 185 | 1.416667 | 2.62083395 | uncultured Campylobacter sp. | 218934 | Bacteria | Bacteria | 116 | 1.78e-30 | NR | WP_297965759.1 | 218934 | g309260 | i0 | 93.4 | 0.989189189189189 | 61 | 4 | 98.9 | 0 | 1 | 183 | 62 | 122 | WP_297965759.1 hypothetical protein [uncultured Campylobacter sp.] | diamond | 183 | 116 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | uncultured Campylobacter sp. | ||
| 32344319 | 32344319 | PRJNA1111146_P_NODE_138079_length_225_cov_2.313953_g136941_i0 | PRJNA1111146 | 138079 | 225 | 2.313953 | 5.20639425 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.3 | 7.01e-8 | NR | GAA9176259.1 | 210 | g136941 | i0 | 53.1 | 0.653333333333333 | 49 | 22 | 64 | 1 | 214 | 71 | 1 | 49 | GAA9176259.1 hypothetical protein Kyoto193A_0410 [Helicobacter pylori] | diamond | 147 | 54.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32691396 | 32691396 | PRJNA1111146_P_NODE_329560_length_183_cov_8.284615_g328422_i0 | PRJNA1111146 | 329560 | 183 | 8.284615 | 15.16084545 | Helicobacter pylori | 210 | Bacteria | Bacteria | 57.4 | 4.89e-9 | NR | GAA6858871.1 | 210 | g328422 | i0 | 92.9 | 0.459016393442623 | 28 | 2 | 45.9 | 0 | 98 | 181 | 4 | 31 | GAA6858871.1 hypothetical protein Kyoto206A_0470 [Helicobacter pylori] | diamond | 84 | 57.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848895 | 32848895 | PRJNA1111146_P_NODE_27940_length_336_cov_1.081272_g26803_i0 | PRJNA1111146 | 27940 | 336 | 1.081272 | 3.63307392 | Helicobacter pylori | 210 | Bacteria | Bacteria | 108 | 2.18e-28 | NR | WP_316479284.1 | 210 | g26803 | i0 | 94.3 | 0.473214285714286 | 53 | 3 | 47.3 | 0 | 243 | 85 | 15 | 67 | WP_316479284.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 159 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848915 | 32848915 | PRJNA1111146_P_NODE_397760_length_179_cov_1.182540_g396622_i0 | PRJNA1111146 | 397760 | 179 | 1.18254 | 2.1167466 | Helicobacter pylori | 210 | Bacteria | Bacteria | 75.1 | 3.71e-16 | NR | GAA8854446.1 | 210 | g396622 | i0 | 78.7 | 0.787709497206704 | 47 | 10 | 78.8 | 0 | 25 | 165 | 24 | 70 | GAA8854446.1 hypothetical protein Kyoto154A_1380 [Helicobacter pylori] | diamond | 141 | 75.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848928 | 32848928 | PRJNA1111146_P_NODE_77600_length_258_cov_1.819512_g76462_i0 | PRJNA1111146 | 77600 | 258 | 1.819512 | 4.69434096 | Helicobacter pylori | 210 | Bacteria | Bacteria | 50.4 | 2.51e-5 | NR | GAA8950287.1 | 210 | g76462 | i0 | 91.7 | 0.63953488372093 | 24 | 2 | 27.9 | 0 | 254 | 183 | 1 | 24 | GAA8950287.1 hypothetical protein Kyoto181A_1460 [Helicobacter pylori] | diamond | 165 | 50.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;