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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA1111146" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111146 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14245670 14245670 PRJNA1111146_P_NODE_399632_length_179_cov_0.904762_g398494_i0 PRJNA1111146 399632 179 0.904762 1.61952398 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 103 3.689999999999999e-24   NR MBC7529420.1 2739509 g398494 i0 79.7 2.96648044692737 59 12 98.9 0 2 178 284 342 MBC7529420.1 sugar transferase [Chthonomonadaceae bacterium] diamond 531 103 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
15519190 15519190 PRJNA1111146_P_NODE_356373_length_182_cov_0.875969_g355235_i0 PRJNA1111146 356373 182 0.875969 1.59426358 Armatimonadota bacterium 2033014 Bacteria Bacteria 110 7.35e-28   NR MCS7236231.1 2033014 g355235 i0 93.2 0.972527472527473 59 4 97.3 0 6 182 1 59 MCS7236231.1 enoyl-CoA hydratase-related protein [Armatimonadota bacterium] diamond 177 110 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26687936 26687936 PRJNA1111146_P_NODE_420921_length_178_cov_0.904000_g419783_i0 PRJNA1111146 420921 178 0.904 1.60912 Armatimonadota bacterium 2033014 Bacteria Bacteria 60.5 4.13e-9   NR MEI6501007.1 2033014 g419783 i0 40.7 1.95505617977528 59 35 99.4 0 178 2 40 98 MEI6501007.1 HAD hydrolase-like protein [Armatimonadota bacterium] diamond 348 60.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26742118 26742118 PRJNA1111146_P_NODE_351401_length_182_cov_0.883721_g350263_i0 PRJNA1111146 351401 182 0.883721 1.60837222 Fimbriimonas 1005038 Bacteria Bacteria 103 4.449999999999999e-24   NR WP_025227134.1 1005039 g350263 i0 79.7 3.84065934065934 59 12 97.3 0 178 2 580 638 WP_025227134.1 hypothetical protein [Fimbriimonas ginsengisoli] diamond 699 103 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26750935 26750935 PRJNA1111146_P_NODE_360241_length_181_cov_2.296875_g359103_i0 PRJNA1111146 360241 181 2.296875 4.15734375 Armatimonadota bacterium 2033014 Bacteria Bacteria 55.1 7.27e-7   NR HOS94387.1 2033014 g359103 i0 51.7 0.994475138121547 60 29 99.4 0 181 2 339 398 HOS94387.1 exo-alpha-sialidase [Armatimonadota bacterium] diamond 180 55.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27090690 27090690 PRJNA1111146_P_NODE_233582_length_199_cov_2.986301_g232444_i0 PRJNA1111146 233582 199 2.986301 5.94273899 Bacteria 2 Bacteria Bacteria 93.6 2.21e-20   NR CUU36639.1 1661582 g232444 i0 100 1.38693467336683 46 0 69.3 0 199 62 445 490 CUU36639.1 adenylyltransferase and sulfurtransferase [Armatimonadetes bacterium GXS] diamond 276 93.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GXS
28078421 28078421 PRJNA1111146_P_NODE_246005_length_197_cov_1.541667_g244867_i0 PRJNA1111146 246005 197 1.541667 3.03708399 Armatimonas rosea 685828 Bacteria Bacteria 100 1.2e-25   NR WP_184196220.1 685828 g244867 i0 77.8 0.959390862944162 63 14 95.9 0 191 3 15 77 WP_184196220.1 helix-turn-helix domain-containing protein [Armatimonas rosea] diamond 189 100 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
28267798 28267798 PRJNA1111146_P_NODE_415466_length_178_cov_0.912000_g414328_i0 PRJNA1111146 415466 178 0.912 1.62336 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 71.6 7.14e-13   NR MCS6775313.1 2739509 g414328 i0 57.6 0.99438202247191 59 25 99.4 0 177 1 186 244 MCS6775313.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 177 71.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28362532 28362532 PRJNA1111146_P_NODE_159286_length_217_cov_2.054878_g158148_i0 PRJNA1111146 159286 217 2.054878 4.45908526 Fimbriimonas sp. 1936159 Bacteria Bacteria 78.6 6.29e-15   NR MEZ0326870.1 1936159 g158148 i0 56.1 3.92626728110599 66 29 91.2 0 199 2 12 77 MEZ0326870.1 type II secretion system protein GspD [Fimbriimonas sp.] diamond 852 78.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28615333 28615333 PRJNA1111146_P_NODE_200407_length_206_cov_1.490196_g199269_i0 PRJNA1111146 200407 206 1.490196 3.06980376 Armatimonadota bacterium 2033014 Bacteria Bacteria 101 4.169999999999999e-23   NR MBN9502317.1 2033014 g199269 i0 70.8 0.946601941747573 65 19 94.7 0 2 196 269 333 MBN9502317.1 hypothetical protein [Armatimonadota bacterium] diamond 195 101 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29814999 29814999 PRJNA1111146_P_NODE_385851_length_180_cov_0.897638_g384713_i0 PRJNA1111146 385851 180 0.897638 1.6157484 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 76.3 2.41e-14   NR WP_025225746.1 1005039 g384713 i0 59.6 0.95 57 23 95 0 3 173 609 665 WP_025225746.1 alpha-mannosidase [Fimbriimonas ginsengisoli] diamond 171 76.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29846699 29846699 PRJNA1111146_P_NODE_236731_length_199_cov_1.260274_g235593_i0 PRJNA1111146 236731 199 1.260274 2.50794526 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.7 1.94e-21   NR MES2462474.1 2033014 g235593 i0 76.5 0.768844221105528 51 12 76.9 0 47 199 219 269 MES2462474.1 glutamate--tRNA ligase [Armatimonadota bacterium] diamond 153 96.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30004710 30004710 PRJNA1111146_P_NODE_328391_length_184_cov_0.862595_g327253_i0 PRJNA1111146 328391 184 0.862595 1.5871748 Fimbriimonas sp. 1936159 Bacteria Bacteria 52.8 4.97e-6   NR MDR3690917.1 1936159 g327253 i0 50 0.815217391304348 50 25 81.5 0 151 2 26 75 MDR3690917.1 ATP-binding protein [Fimbriimonas sp.] diamond 150 52.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30036245 30036245 PRJNA1111146_P_NODE_180111_length_210_cov_2.585987_g178973_i0 PRJNA1111146 180111 210 2.585987 5.4305727 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.7 2.48e-21   NR MBI3924048.1 2033014 g178973 i0 63.8 1.97142857142857 69 25 98.6 0 2 208 715 783 MBI3924048.1 patatin-like phospholipase family protein [Armatimonadota bacterium] diamond 414 96.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30289361 30289361 PRJNA1111146_P_NODE_353912_length_182_cov_0.883721_g352774_i0 PRJNA1111146 353912 182 0.883721 1.60837222 Armatimonadota bacterium 2033014 Bacteria Bacteria 133 2.45e-34   NR MCL6533537.1 2033014 g352774 i0 100 0.972527472527473 59 0 97.3 0 2 178 553 611 MCL6533537.1 hypothetical protein [Armatimonadota bacterium] diamond 177 133 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30321130 30321130 PRJNA1111146_P_NODE_39952_length_305_cov_1.349206_g38815_i0 PRJNA1111146 39952 305 1.349206 4.1150783 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 69.7 2.62e-11   NR MFN3730446.1 2682144 g38815 i0 64.3 0.550819672131148 56 20 55.1 0 136 303 740 795 MFN3730446.1 VIT domain-containing protein [Fimbriimonadaceae bacterium] diamond 168 69.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30889333 30889333 PRJNA1111146_P_NODE_324774_length_184_cov_0.870229_g323636_i0 PRJNA1111146 324774 184 0.870229 1.60122136 Fimbriimonas sp. 1936159 Bacteria Bacteria 89.7 4.35e-19   NR MEZ0325045.1 1936159 g323636 i0 72.1 0.994565217391304 61 17 99.5 0 183 1 319 379 MEZ0325045.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Fimbriimonas sp.] diamond 183 89.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31616400 31616400 PRJNA1111146_P_NODE_337376_length_183_cov_0.876923_g336238_i0 PRJNA1111146 337376 183 0.876923 1.60476909 Armatimonadota bacterium 2033014 Bacteria Bacteria 41.6 0.0406   NR MER3496497.1 2033014 g336238 i0 39.7 1.0327868852459 63 32 93.4 1 9 179 183 245 MER3496497.1 hypothetical protein [Armatimonadota bacterium] diamond 189 41.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32249526 32249526 PRJNA1111146_P_NODE_290378_length_189_cov_0.977941_g289240_i0 PRJNA1111146 290378 189 0.977941 1.84830849 Armatimonadota bacterium 2033014 Bacteria Bacteria 77 1.46e-15   NR MCS7235604.1 2033014 g289240 i0 90.5 0.666666666666667 42 4 66.7 0 64 189 1 42 MCS7235604.1 protoglobin domain-containing protein [Armatimonadota bacterium] diamond 126 77 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32628353 32628353 PRJNA1111146_P_NODE_338500_length_183_cov_0.876923_g337362_i0 PRJNA1111146 338500 183 0.876923 1.60476909 Armatimonadota bacterium 2033014 Bacteria Bacteria 116 6.58e-30   NR MBC8135111.1 2033014 g337362 i0 91.7 1.9672131147541 60 5 98.4 0 2 181 159 218 MBC8135111.1 hypothetical protein [Armatimonadota bacterium] diamond 360 116 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;