RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1111146" and tax_clade = "core chlorophytes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 9 ✖

bioproject 1

  • PRJNA1111146 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16793676 16793676 PRJNA1111146_P_NODE_354254_length_182_cov_0.883721_g353116_i0 PRJNA1111146 354254 182 0.883721 1.60837222 root 1 Root_unresolved Root_unresolved 87 4.08e-18   NR KAL4853082.1 3077 g353116 i0 83.3 8.25824175824176 42 7 69.2 0 1 126 84 125 KAL4853082.1 Ribonuclease J [Chlorella vulgaris] diamond 1503 87 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27636620 27636620 PRJNA1111146_P_NODE_315284_length_185_cov_0.863636_g314146_i0 PRJNA1111146 315284 185 0.863636 1.5977266 Monoraphidium neglectum 145388 Plants Plants 51.6 2.29e-6   NR XP_013895809.1 145388 g314146 i0 63.9 0.583783783783784 36 13 58.4 0 108 1 1 36 XP_013895809.1 hypothetical protein MNEG_11174 [Monoraphidium neglectum] diamond 108 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
27699955 27699955 PRJNA1111146_P_NODE_251624_length_196_cov_1.328671_g250486_i0 PRJNA1111146 251624 196 1.328671 2.60419516 Trebouxia sp. A1-2 2608996 Plants Plants 70.9 2.35e-12   NR KAA6420936.1 2608996 g250486 i0 89.2 0.566326530612245 37 4 56.6 0 84 194 1 37 KAA6420936.1 MAG: hypothetical protein FRX49_09077 [Trebouxia sp. A1-2] diamond 111 70.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27920576 27920576 PRJNA1111146_P_NODE_341485_length_183_cov_0.869231_g340347_i0 PRJNA1111146 341485 183 0.869231 1.59069273 Micractinium conductrix 554055 Plants Plants 57.4 1.18e-7   NR PSC74993.1 554055 g340347 i0 90 0.491803278688525 30 3 49.2 0 165 76 863 892 PSC74993.1 ankyrin repeat [Micractinium conductrix] diamond 90 57.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
28962815 28962815 PRJNA1111146_P_NODE_357188_length_182_cov_0.875969_g356050_i0 PRJNA1111146 357188 182 0.875969 1.59426358 Micractinium tetrahymenae 2728915 Plants Plants 70.5 2.7e-12   NR KAL4422479.1 2728915 g356050 i0 84.8 0.543956043956044 33 5 54.4 0 99 1 280 312 KAL4422479.1 hypothetical protein ABPG75_008676 [Micractinium tetrahymenae] diamond 99 70.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
29679692 29679692 PRJNA1111146_P_NODE_358910_length_182_cov_0.868217_g357772_i0 PRJNA1111146 358910 182 0.868217 1.58015494 Trebouxiophyceae 75966 Plants Plants 43.9 0.00597   NR PRW56719.1 3076 g357772 i0 43.5 1.45054945054945 46 26 75.8 0 42 179 177 222 PRW56719.1 SOUL heme-binding [Chlorella sorokiniana] diamond 264 43.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31490134 31490134 PRJNA1111146_P_NODE_218296_length_203_cov_0.986667_g217158_i0 PRJNA1111146 218296 203 0.986667 2.00293401 Chlorella sorokiniana 3076 Plants Plants 68.6 1.76e-11   NR PRW58082.1 3076 g217158 i0 53 2.76354679802956 66 27 97.5 2 203 6 1409 1470 PRW58082.1 strawberry notch-like protein 1-like [Chlorella sorokiniana] diamond 561 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31584954 31584954 PRJNA1111146_P_NODE_108656_length_239_cov_1.204301_g107518_i0 PRJNA1111146 108656 239 1.204301 2.87827939 Tetradesmus obliquus 3088 Plants Plants 57 3.12e-7   NR WIA23049.1 3088 g107518 i0 48.6 0.928870292887029 74 37 91.6 1 236 18 137 210 WIA23049.1 hypothetical protein OEZ85_001398 [Tetradesmus obliquus] diamond 222 57 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
32659792 32659792 PRJNA1111146_P_NODE_347940_length_182_cov_1.410853_g346802_i0 PRJNA1111146 347940 182 1.410853 2.56775246 Micractinium conductrix 554055 Plants Plants 45.1 0.00126   NR PSC75108.1 554055 g346802 i0 81 0.346153846153846 21 4 34.6 0 91 29 133 153 PSC75108.1 hypothetical protein C2E20_1860 [Micractinium conductrix] diamond 63 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;