RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1111082" and tax_phylum = "Arthropoda"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111082 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27289028 27289028 PRJNA1111082_P_NODE_9923_length_258_cov_1.308108_g9878_i0 PRJNA1111082 9923 258 1.308108 3.37491864 Cordylochernes scorpioides 51811 Arthropoda Arthropoda 83.2 2.64e-16   NR UYV67927.1 51811 g9878 i0 47.5 2.88372093023256 80 42 93 0 254 15 769 848 UYV67927.1 hypothetical protein LAZ67_5002522 [Cordylochernes scorpioides] diamond 744 83.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Pseudoscorpiones Chernetidae Cordylochernes Cordylochernes scorpioides
28858977 28858977 PRJNA1111082_P_NODE_10648_length_252_cov_0.871508_g10603_i0 PRJNA1111082 10648 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 45.8 0.00274   NR YP_009480269.1 1580118 g10603 i0 68 2.17857142857143 25 8 29.8 0 252 178 193 217 YP_009480269.1 cytochrome c oxidase subunit II [Navis striatus] diamond 549 45.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Argasidae Navis Navis striatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;