RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1111077" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29435854 29435854 PRJNA1111077_P_NODE_37810_length_230_cov_2.286624_g37589_i0 PRJNA1111077 37810 230 2.286624 5.2592352 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.7 1.46e-6   NR MDD5721070.1 2053589 g37589 i0 86.2 1.13478260869565 29 4 37.8 0 1 87 231 259 MDD5721070.1 type I methionyl aminopeptidase [Candidatus Paceibacterota bacterium] diamond 261 54.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30731221 30731221 PRJNA1111077_P_NODE_24834_length_270_cov_2.695431_g24613_i0 PRJNA1111077 24834 270 2.695431 7.2776637 Minisyncoccota bacterium 2053589 Bacteria Bacteria 114 2.15e-27   NR HRH24091.1 2053589 g24613 i0 64 0.988888888888889 89 32 98.9 0 1 267 194 282 HRH24091.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Candidatus Paceibacterota bacterium] diamond 267 114 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;