RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1111077" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26900947 26900947 PRJNA1111077_P_NODE_33421_length_246_cov_0.890173_g33200_i0 PRJNA1111077 33421 246 0.890173 2.18982558 Metazoa 33208 Annelida Annelida 91.7 1.45e-20   NR XP_009023312.1 6412 g33200 i0 56.8 11.8048780487805 81 33 98.8 1 2 244 149 227 XP_009023312.1 hypothetical protein HELRODRAFT_84353 [Helobdella robusta] diamond 2904 91.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
31141638 31141638 PRJNA1111077_P_NODE_21675_length_281_cov_2.163462_g21454_i0 PRJNA1111077 21675 281 2.163462 6.07932822 Dimorphilus gyrociliatus 2664684 Annelida Annelida 83.2 2.23e-17   NR CAD5121738.1 2664684 g21454 i0 42.4 9.01067615658363 92 52 98.2 1 6 281 9 99 CAD5121738.1 DgyrCDS10215 [Dimorphilus gyrociliatus] diamond 2532 83.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;