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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA1111077" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJNA1111077 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2765541 2765541 PRJNA1111077_P_NODE_31303_length_249_cov_1.670455_g31082_i0 PRJNA1111077 31303 249 1.670455 4.15943295 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 1.48e-25   NR XP_004353558.1 1257118 g31082 i0 70 1.67469879518072 70 21 84.3 0 248 39 98 167 XP_004353558.1 uncharacterized protein ACA1_144210 [Acanthamoeba castellanii str. Neff] diamond 417 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5317806 5317806 PRJNA1111077_P_NODE_34145_length_245_cov_0.895349_g33924_i0 PRJNA1111077 34145 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99 1.49e-22   NR XP_003284553.1 5786 g33924 i0 65.7 6.41632653061224 67 23 82 0 214 14 108 174 XP_003284553.1 uncharacterized protein DICPUDRAFT_96752 [Dictyostelium purpureum] diamond 1572 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
7867401 7867401 PRJNA1111077_P_NODE_22447_length_279_cov_1.233010_g22226_i0 PRJNA1111077 22447 279 1.23301 3.4400979 Evosea 2605435 Evosea other_Eukaryota 174 4.089999999999999e-52   NR XP_020429869.1 670386 g22226 i0 83.9 6 93 15 100 0 279 1 35 127 XP_020429869.1 subunit of heterodimeric actin capping protein cap32/34 [Heterostelium album PN500] diamond 1674 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
7867536 7867536 PRJNA1111077_P_NODE_28127_length_258_cov_2.102703_g27906_i0 PRJNA1111077 28127 258 2.102703 5.42497374 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 107 1.0799999999999999e-24   NR XP_004336225.1 1257118 g27906 i0 65.9 7.62790697674419 82 28 95.3 0 250 5 262 343 XP_004336225.1 gammaadaptin 1, putative [Acanthamoeba castellanii str. Neff] diamond 1968 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11693294 11693294 PRJNA1111077_P_NODE_22870_length_277_cov_2.215686_g22649_i0 PRJNA1111077 22870 277 2.215686 6.13745022 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 3.56e-31   NR XP_004334355.1 1257118 g22649 i0 56 1.9927797833935 91 40 98.6 0 276 4 315 405 XP_004334355.1 protein disulfideisomerase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 552 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11693366 11693366 PRJNA1111077_P_NODE_25490_length_268_cov_1.579487_g25269_i0 PRJNA1111077 25490 268 1.579487 4.23302516 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 133 4.47e-34   NR PRP86558.1 1890364 g25269 i0 70.2 0.940298507462687 84 25 94 0 252 1 440 523 PRP86558.1 ribosomal protein S18 isoform 1 [Planoprotostelium fungivorum] diamond 252 133 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27162375 27162375 PRJNA1111077_P_NODE_34242_length_245_cov_0.895349_g34021_i0 PRJNA1111077 34242 245 0.895349 2.19360505 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89.7 1.58e-21   NR XP_004352995.1 1257118 g34021 i0 62.1 1.7265306122449 66 25 80.8 0 2 199 5 70 XP_004352995.1 uncharacterized protein ACA1_070880 [Acanthamoeba castellanii str. Neff] diamond 423 89.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27185297 27185297 PRJNA1111077_P_NODE_12822_length_331_cov_2.003876_g12601_i0 PRJNA1111077 12822 331 2.003876 6.63282956 Eumycetozoa 142796 Evosea other_Eukaryota 201 5.45e-58   NR XP_003292154.1 5786 g12601 i0 85.5 6.97885196374622 110 16 99.7 0 1 330 451 560 XP_003292154.1 major vault protein-alpha [Dictyostelium purpureum] diamond 2310 201 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27541762 27541762 PRJNA1111077_P_NODE_27704_length_260_cov_1.529412_g27483_i0 PRJNA1111077 27704 260 1.529412 3.9764712 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 59.3 6.65e-8   NR KYQ89250.1 361077 g27483 i0 32.6 1.96153846153846 86 56 99.2 2 3 260 480 563 KYQ89250.1 hypothetical protein DLAC_09905, partial [Tieghemostelium lacteum] diamond 510 59.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27636591 27636591 PRJNA1111077_P_NODE_36244_length_242_cov_0.911243_g36023_i0 PRJNA1111077 36244 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72 1.79e-12   NR XP_004341420.1 1257118 g36023 i0 48.1 0.954545454545455 77 37 95.5 1 6 236 478 551 XP_004341420.1 vacuolar sorting protein, putative [Acanthamoeba castellanii str. Neff] diamond 231 72 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28046873 28046873 PRJNA1111077_P_NODE_32205_length_248_cov_0.880000_g31984_i0 PRJNA1111077 32205 248 0.88 2.1824 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.8 6.43e-4   NR KAH3757540.1 1580589 g31984 i0 35.4 0.991935483870968 82 48 98 3 5 247 254 331 KAH3757540.1 hypothetical protein Pelo_10656 [Pelomyxa schiedti] diamond 246 47.8 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28962773 28962773 PRJNA1111077_P_NODE_27908_length_259_cov_1.655914_g27687_i0 PRJNA1111077 27908 259 1.655914 4.28881726 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 132 1.79e-36   NR PRP80408.1 1890364 g27687 i0 77.6 35.4440154440154 85 19 98.5 0 2 256 60 144 PRP80408.1 40S ribosomal protein S9 [Planoprotostelium fungivorum] diamond 9180 132 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29878349 29878349 PRJNA1111077_P_NODE_25011_length_270_cov_1.375635_g24790_i0 PRJNA1111077 25011 270 1.375635 3.7142145 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 97.4 3.18e-21   NR XP_004339747.1 1257118 g24790 i0 52.7 1.01111111111111 91 42 100 1 270 1 923 1013 XP_004339747.1 leucine rich repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 273 97.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30004661 30004661 PRJNA1111077_P_NODE_14771_length_310_cov_5.088608_g14550_i0 PRJNA1111077 14771 310 5.088608 15.7746848 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 48.5 4.23e-4   NR KYQ93088.1 361077 g14550 i0 42.6 1.96451612903226 47 26 45.5 1 148 8 82 127 KYQ93088.1 Ras GTPase [Tieghemostelium lacteum] diamond 609 48.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30130602 30130602 PRJNA1111077_P_NODE_26632_length_264_cov_1.612565_g26411_i0 PRJNA1111077 26632 264 1.612565 4.2571716 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 155 1.56e-41   NR PRP86903.1 1890364 g26411 i0 83.9 1.97727272727273 87 14 98.9 0 2 262 246 332 PRP86903.1 elongation factor 2-like isoform 1 [Planoprotostelium fungivorum] diamond 522 155 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30352678 30352678 PRJNA1111077_P_NODE_35392_length_243_cov_0.905882_g35171_i0 PRJNA1111077 35392 243 0.905882 2.20129326 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 82.8 3.03e-16   NR PRP82175.1 1890364 g35171 i0 53.7 1.01234567901235 82 37 100 1 243 1 598 679 PRP82175.1 Ras GTPase-activating protein [Planoprotostelium fungivorum] diamond 246 82.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30573022 30573022 PRJNA1111077_P_NODE_12893_length_330_cov_2.311284_g12672_i0 PRJNA1111077 12893 330 2.311284 7.6272372 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 94.4 3.51e-20   NR KAH3758824.1 1580589 g12672 i0 47.7 0.990909090909091 109 53 97.3 3 325 5 241 347 KAH3758824.1 hypothetical protein Pelo_9343 [Pelomyxa schiedti] diamond 327 94.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31901054 31901054 PRJNA1111077_P_NODE_29497_length_253_cov_1.516667_g29276_i0 PRJNA1111077 29497 253 1.516667 3.83716751 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 59.3 6.09e-8   NR KYQ91298.1 361077 g29276 i0 41 2.20553359683794 61 36 72.3 0 253 71 465 525 KYQ91298.1 eIF-3 zeta [Tieghemostelium lacteum] diamond 558 59.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32154231 32154231 PRJNA1111077_P_NODE_34098_length_245_cov_0.895349_g33877_i0 PRJNA1111077 34098 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.9 6.74e-13   NR PRP89677.1 1890364 g33877 i0 53.3 0.918367346938776 75 34 91.8 1 226 2 7 80 PRP89677.1 COMM domain-containing protein 9-like [Planoprotostelium fungivorum] diamond 225 70.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32808638 32808638 PRJNA1111077_P_NODE_24020_length_273_cov_2.370000_g23799_i0 PRJNA1111077 24020 273 2.37 6.4701 Eumycetozoa 142796 Evosea other_Eukaryota 150 1.6799999999999994e-42   NR XP_003287614.1 5786 g23799 i0 85.6 4.9010989010989 90 12 98.9 1 273 4 126 214 XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] diamond 1338 150 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;