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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA1108487" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1108487 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6123609 6123609 PRJNA1108487_P_NODE_4045_length_345_cov_1.128676_g3979_i0 PRJNA1108487 4045 345 1.128676 3.8939322 Pseudomonadati 3379134 Bacteria Bacteria 125 1.61e-30   NR MCS6817120.1 2052146 g3979 i0 77.5 5.82608695652174 80 18 69.6 0 36 275 1371 1450 MCS6817120.1 glutamate synthase large subunit [Blastocatellia bacterium] diamond 2010 125 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
9141040 9141040 PRJNA1108487_P_NODE_3308_length_375_cov_1.549669_g3242_i0 PRJNA1108487 3308 375 1.549669 5.81125875 Bacteria 2 Bacteria Bacteria 194 3.29e-57   NR MEA2489257.1 1978231 g3242 i0 74.8 46.152 119 30 95.2 0 2 358 321 439 MEA2489257.1 adenosylhomocysteinase [Acidobacteriota bacterium] diamond 17307 195 0.994871794871795 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
9141084 9141084 PRJNA1108487_P_NODE_8908_length_251_cov_0.876404_g8842_i0 PRJNA1108487 8908 251 0.876404 2.19977404 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 60.5 2.34e-8   NR HYW48003.1 2212468 g8842 i0 49.4 1.92430278884462 81 38 95.6 2 11 250 16 94 HYW48003.1 hypothetical protein [Bryobacteraceae bacterium] diamond 483 60.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
11692106 11692106 PRJNA1108487_P_NODE_4030_length_345_cov_1.687500_g3964_i0 PRJNA1108487 4030 345 1.6875 5.821875 Terriglobales bacterium 2282142 Bacteria Bacteria 125 1.1e-31   NR HXY49553.1 2282142 g3964 i0 75.6 2.03478260869565 78 17 67.8 1 1 234 244 319 HXY49553.1 glycoside hydrolase family 27 protein [Terriglobales bacterium] diamond 702 125 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
11692126 11692126 PRJNA1108487_P_NODE_7610_length_263_cov_1.642105_g7544_i0 PRJNA1108487 7610 263 1.642105 4.31873615 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 117 9.59e-29   NR HEV2273247.1 2052142 g7544 i0 59.8 4.95057034220532 87 33 99.2 1 2 262 339 423 HEV2273247.1 malate synthase A [Acidobacteriaceae bacterium] diamond 1302 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
27288971 27288971 PRJNA1108487_P_NODE_1803_length_503_cov_0.997674_g1737_i0 PRJNA1108487 1803 503 0.997674 5.01830022 Acidobacteriota bacterium 1978231 Bacteria Bacteria 55.1 2.4e-5   NR MBN1566786.1 1978231 g1737 i0 65.9 0.495029821073559 41 14 24.5 0 2 124 2 42 MBN1566786.1 WD40 repeat domain-containing protein [Acidobacteriota bacterium] diamond 249 55.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27352442 27352442 PRJNA1108487_P_NODE_10083_length_246_cov_0.901734_g10017_i0 PRJNA1108487 10083 246 0.901734 2.21826564 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 103 1.56e-23   NR HET6890628.1 2283092 g10017 i0 64.1 5.63414634146341 78 24 95.1 2 234 1 504 577 HET6890628.1 M28 family metallopeptidase [Pyrinomonadaceae bacterium] diamond 1386 103 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27604991 27604991 PRJNA1108487_P_NODE_4824_length_320_cov_0.947368_g4758_i0 PRJNA1108487 4824 320 0.947368 3.0315776 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 58.2 2.88e-7   NR MEO6392033.1 2283092 g4758 i0 41 0.778125 83 44 75.9 2 318 76 141 220 MEO6392033.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 249 58.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27911597 27911597 PRJNA1108487_P_NODE_10505_length_245_cov_0.906977_g10439_i0 PRJNA1108487 10505 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.0441   NR HWU00312.1 2282142 g10439 i0 46.9 0.783673469387755 32 14 39.2 1 197 102 141 169 HWU00312.1 CpaD family pilus assembly lipoprotein [Terriglobales bacterium] diamond 192 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27920476 27920476 PRJNA1108487_P_NODE_2425_length_436_cov_1.261708_g2359_i0 PRJNA1108487 2425 436 1.261708 5.50104688 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 133 5.04e-33   NR HZU31460.1 2976921 g2359 i0 50 5.00917431192661 146 67 99.8 2 2 436 605 745 HZU31460.1 galactose oxidase-like domain-containing protein [Candidatus Angelobacter sp.] diamond 2184 133 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
28078346 28078346 PRJNA1108487_P_NODE_3525_length_365_cov_1.602740_g3459_i0 PRJNA1108487 3525 365 1.60274 5.850001 Blastocatellia bacterium 2052146 Bacteria Bacteria 56.2 5.83e-7   NR MDX6498392.1 2052146 g3459 i0 50 0.410958904109589 50 25 41.1 0 160 309 14 63 MDX6498392.1 hypothetical protein [Blastocatellia bacterium] diamond 150 56.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28299380 28299380 PRJNA1108487_P_NODE_1646_length_524_cov_1.383592_g1580_i0 PRJNA1108487 1646 524 1.383592 7.25002208 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 138 2.86e-36   NR MDR3737318.1 2052142 g1580 i0 45.8 2.87977099236641 179 86 99.6 5 2 523 118 290 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 1509 138 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28394100 28394100 PRJNA1108487_P_NODE_11246_length_242_cov_0.923077_g11180_i0 PRJNA1108487 11246 242 0.923077 2.23384634 Terracidiphilus sp. 1964191 Bacteria Bacteria 41.2 0.0367   NR HEY1257492.1 1964191 g11180 i0 34.6 1.00413223140496 81 41 85.5 2 240 34 18 98 HEY1257492.1 STAS domain-containing protein [Terracidiphilus sp.] diamond 243 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
28732840 28732840 PRJNA1108487_P_NODE_11087_length_243_cov_0.917647_g11021_i0 PRJNA1108487 11087 243 0.917647 2.22988221 Pseudomonadati 3379134 Bacteria Bacteria 87 1.29e-18   NR MBW4077046.1 1978231 g11021 i0 53.4 1.87654320987654 73 33 88.9 1 237 22 90 162 MBW4077046.1 class I SAM-dependent methyltransferase [Acidobacteriota bacterium] diamond 456 87.8 0.990888382687927 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29088879 29088879 PRJNA1108487_P_NODE_7428_length_266_cov_1.616580_g7362_i0 PRJNA1108487 7428 266 1.61658 4.3001028 Acidobacteriota bacterium 1978231 Bacteria Bacteria 50.1 1.25e-4   NR MEM7246052.1 1978231 g7362 i0 58.8 0.383458646616541 34 14 38.3 0 109 8 125 158 MEM7246052.1 polynucleotide adenylyltransferase PcnB [Acidobacteriota bacterium] diamond 102 50.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29499193 29499193 PRJNA1108487_P_NODE_3070_length_388_cov_1.574603_g3004_i0 PRJNA1108487 3070 388 1.574603 6.10945964 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 64.3 5.34e-9   NR HTP31531.1 2952895 g3004 i0 36.5 0.804123711340206 104 55 75 2 3 293 2 101 HTP31531.1 hypothetical protein [Candidatus Acidiferrales bacterium] diamond 312 64.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
29688403 29688403 PRJNA1108487_P_NODE_11250_length_242_cov_0.923077_g11184_i0 PRJNA1108487 11250 242 0.923077 2.23384634 Blastocatellia bacterium 2052146 Bacteria Bacteria 60.5 2.02e-8   NR HLG12932.1 2052146 g11184 i0 48.3 3.24793388429752 58 29 70.7 1 237 67 340 397 HLG12932.1 alkaline phosphatase D family protein [Blastocatellia bacterium] diamond 786 60.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29972944 29972944 PRJNA1108487_P_NODE_4331_length_335_cov_0.877863_g4265_i0 PRJNA1108487 4331 335 0.877863 2.94084105 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 45.8 0.00898   NR HTS64537.1 2952895 g4265 i0 38.5 2.85671641791045 91 40 67.2 3 242 18 169 259 HTS64537.1 protein kinase [Candidatus Acidiferrales bacterium] diamond 957 45.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
30036178 30036178 PRJNA1108487_P_NODE_6951_length_273_cov_2.285000_g6885_i0 PRJNA1108487 6951 273 2.285 6.23805 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47.4 0.00119   NR MBI1872622.1 1978231 g6885 i0 48 0.549450549450549 50 26 54.9 0 15 164 259 308 MBI1872622.1 hypothetical protein [Acidobacteriota bacterium] diamond 150 47.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31354661 31354661 PRJNA1108487_P_NODE_9596_length_248_cov_0.891429_g9530_i0 PRJNA1108487 9596 248 0.891429 2.21074392 Pseudomonadati 3379134 Bacteria Bacteria 43.1 0.0274   NR HEX8472706.1 2283092 g9530 i0 38.2 1.72983870967742 68 22 58.1 3 37 180 159 226 HEX8472706.1 glycosyltransferase [Pyrinomonadaceae bacterium] diamond 429 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31417819 31417819 PRJNA1108487_P_NODE_936_length_676_cov_1.265340_g874_i0 PRJNA1108487 936 676 1.26534 8.5536984 Bacteria 2 Bacteria Bacteria 283 1.27e-92   NR MEP7354945.1 1978231 g874 i0 62.3 20.7825443786982 223 80 99 1 675 7 34 252 MEP7354945.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] diamond 14049 285 0.992982456140351 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31837576 31837576 PRJNA1108487_P_NODE_1697_length_516_cov_2.769752_g1631_i0 PRJNA1108487 1697 516 2.769752 14.29192032 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 138 2.57e-36   NR MDR3737318.1 2052142 g1631 i0 46.5 1.97674418604651 170 86 97.1 3 515 15 141 308 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 1020 138 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
32280946 32280946 PRJNA1108487_P_NODE_539_length_871_cov_3.909774_g486_i0 PRJNA1108487 539 871 3.909774 34.05413154 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 210 1.65e-62   NR HEY5837861.1 2283092 g486 i0 58.7 4.10907003444317 196 79 67.5 1 768 181 134 327 HEY5837861.1 peptidoglycan-binding protein [Pyrinomonadaceae bacterium] diamond 3579 210 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;