RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1108487" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA1108487 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27162335 27162335 PRJNA1108487_P_NODE_6322_length_286_cov_1.098592_g6256_i0 PRJNA1108487 6322 286 1.098592 3.14197312 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 73.6 6.87e-14   NR TFF96507.1 2053491 g6256 i0 39.5 13.5944055944056 76 43 76.6 1 61 279 8 83 TFF96507.1 MAG: GTP-binding protein [Candidatus Thorarchaeota archaeon] diamond 3888 73.6 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
28669745 28669745 PRJNA1108487_P_NODE_8927_length_251_cov_0.876404_g8861_i0 PRJNA1108487 8927 251 0.876404 2.19977404 Candidatus Heimdallarchaeum 3053649 Archaea Archaea 98.6 9.72e-23   NR MCK4973296.1 2026747 g8861 i0 60.5 8.7609561752988 81 32 96.8 0 2 244 164 244 MCK4973296.1 MMPL family transporter [Candidatus Heimdallarchaeota archaeon] diamond 2199 98.6 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;