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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1108009" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108009 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2763796 2763796 PRJNA1108009_P_NODE_26723_length_248_cov_0.880000_g26405_i0 PRJNA1108009 26723 248 0.88 2.1824 Akkermansia sp. 1872421 Bacteria Bacteria 169 1.41e-49   NR MBR6576899.1 1872421 g26405 i0 98.8 1.98387096774194 82 1 99.2 0 2 247 127 208 MBR6576899.1 hypothetical protein [Akkermansia sp.] diamond 492 169 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
10416612 10416612 PRJNA1108009_P_NODE_30909_length_242_cov_0.911243_g30591_i0 PRJNA1108009 30909 242 0.911243 2.20520806 Akkermansia sp. 1872421 Bacteria Bacteria 160 1.0499999999999999e-47   NR MBR6575989.1 1872421 g30591 i0 98.8 2.96280991735537 80 1 99.2 0 240 1 90 169 MBR6575989.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Akkermansia sp.] diamond 717 160 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
26592663 26592663 PRJNA1108009_P_NODE_28401_length_246_cov_0.890173_g28083_i0 PRJNA1108009 28401 246 0.890173 2.18982558 Akkermansia sp. 1872421 Bacteria Bacteria 55.5 1.21e-6   NR MBP3500293.1 1872421 g28083 i0 89.3 1.02439024390244 28 3 34.1 0 85 2 325 352 MBP3500293.1 ATP-binding protein [Akkermansia sp.] diamond 252 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
27099257 27099257 PRJNA1108009_P_NODE_20402_length_284_cov_1.464455_g20084_i0 PRJNA1108009 20402 284 1.464455 4.1590522 Akkermansia sp. 1872421 Bacteria Bacteria 164 1.26e-44   NR MBR5876709.1 1872421 g20084 i0 84 1.98591549295775 94 15 99.3 0 2 283 55 148 MBR5876709.1 toll/interleukin-1 receptor domain-containing protein [Akkermansia sp.] diamond 564 164 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
27099262 27099262 PRJNA1108009_P_NODE_27702_length_247_cov_0.885057_g27384_i0 PRJNA1108009 27702 247 0.885057 2.18609079 Akkermansia sp. 1872421 Bacteria Bacteria 85.9 2.45e-17   NR MBR3902735.1 1872421 g27384 i0 60.7 1.02024291497976 84 24 99.6 2 247 2 190 266 MBR3902735.1 autotransporter outer membrane beta-barrel domain-containing protein [Akkermansia sp.] diamond 252 85.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
27225571 27225571 PRJNA1108009_P_NODE_23783_length_257_cov_1.369565_g23465_i0 PRJNA1108009 23783 257 1.369565 3.51978205 Akkermansia sp. 1872421 Bacteria Bacteria 174 2.5599999999999994e-48   NR MBQ7024911.1 1872421 g23465 i0 98.8 1.98443579766537 85 1 99.2 0 256 2 468 552 MBQ7024911.1 hypothetical protein [Akkermansia sp.] diamond 510 174 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
27288964 27288964 PRJNA1108009_P_NODE_31383_length_241_cov_0.916667_g31065_i0 PRJNA1108009 31383 241 0.916667 2.20916747 Akkermansia sp. 1872421 Bacteria Bacteria 167 6.859999999999999e-47   NR MBQ9829073.1 1872421 g31065 i0 97.5 0.995850622406639 80 2 99.6 0 240 1 187 266 MBQ9829073.1 membrane protein insertase YidC [Akkermansia sp.] diamond 240 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
27604984 27604984 PRJNA1108009_P_NODE_31724_length_241_cov_0.916667_g31406_i0 PRJNA1108009 31724 241 0.916667 2.20916747 Opitutales bacterium 2026772 Bacteria Bacteria 65.9 1.47e-10   NR MBR5623192.1 2026772 g31406 i0 55.4 0.921161825726141 74 23 83.4 2 236 36 206 276 MBR5623192.1 MotA/TolQ/ExbB proton channel family protein [Opitutales bacterium] diamond 222 65.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
28204518 28204518 PRJNA1108009_P_NODE_26326_length_249_cov_0.875000_g26008_i0 PRJNA1108009 26326 249 0.875 2.17875 Akkermansia sp. 1872421 Bacteria Bacteria 162 1.04e-48   NR MBR3943771.1 1872421 g26008 i0 96.4 2 83 3 100 0 1 249 57 139 MBR3943771.1 septum formation protein Maf [Akkermansia sp.] diamond 498 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28330930 28330930 PRJNA1108009_P_NODE_27026_length_248_cov_0.880000_g26708_i0 PRJNA1108009 27026 248 0.88 2.1824 Akkermansia sp. 1872421 Bacteria Bacteria 61.6 8.74e-9   NR MBQ9835454.1 1872421 g26708 i0 90.3 0.375 31 3 37.5 0 246 154 604 634 MBQ9835454.1 sulfatase-like hydrolase/transferase [Akkermansia sp.] diamond 93 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28488949 28488949 PRJNA1108009_P_NODE_31547_length_241_cov_0.916667_g31229_i0 PRJNA1108009 31547 241 0.916667 2.20916747 Akkermansia sp. 1872421 Bacteria Bacteria 116 5e-28   NR MBR6576566.1 1872421 g31229 i0 69.2 0.970954356846473 78 24 97.1 0 7 240 407 484 MBR6576566.1 hypothetical protein [Akkermansia sp.] diamond 234 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28520547 28520547 PRJNA1108009_P_NODE_21567_length_275_cov_1.356436_g21249_i0 PRJNA1108009 21567 275 1.356436 3.730199 Akkermansia sp. 1872421 Bacteria Bacteria 144 4.02e-42   NR MBQ8377312.1 1872421 g21249 i0 95.8 0.774545454545455 71 3 77.5 0 63 275 1 71 MBQ8377312.1 helix-turn-helix transcriptional regulator [Akkermansia sp.] diamond 213 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28931001 28931001 PRJNA1108009_P_NODE_26908_length_248_cov_0.880000_g26590_i0 PRJNA1108009 26908 248 0.88 2.1824 Akkermansia sp. 1872421 Bacteria Bacteria 164 1.08e-45   NR MBQ3217635.1 1872421 g26590 i0 96.3 0.991935483870968 82 3 99.2 0 1 246 40 121 MBQ3217635.1 amidophosphoribosyltransferase [Akkermansia sp.] diamond 246 164 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
29025959 29025959 PRJNA1108009_P_NODE_27788_length_247_cov_0.885057_g27470_i0 PRJNA1108009 27788 247 0.885057 2.18609079 Akkermansia sp. 1872421 Bacteria Bacteria 158 7.92e-43   NR MBP3500224.1 1872421 g27470 i0 87.8 1.9919028340081 82 10 99.6 0 246 1 860 941 MBP3500224.1 hypothetical protein [Akkermansia sp.] diamond 492 158 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
29309751 29309751 PRJNA1108009_P_NODE_29449_length_244_cov_0.900585_g29131_i0 PRJNA1108009 29449 244 0.900585 2.1974274 Opitutales bacterium 2026772 Bacteria Bacteria 90.1 4.97e-19   NR MDY6069594.1 2026772 g29131 i0 56.8 1.99180327868852 81 35 99.6 0 244 2 318 398 MDY6069594.1 glycosyltransferase family 4 protein [Opitutales bacterium] diamond 486 90.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29814893 29814893 PRJNA1108009_P_NODE_23751_length_257_cov_2.326087_g23433_i0 PRJNA1108009 23751 257 2.326087 5.97804359 Akkermansia sp. 1872421 Bacteria Bacteria 135 1.54e-36   NR MBR5331169.1 1872421 g23433 i0 93.8 0.75875486381323 65 4 75.9 0 195 1 1 65 MBR5331169.1 thioredoxin family protein [Akkermansia sp.] diamond 195 135 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
30289266 30289266 PRJNA1108009_P_NODE_29632_length_244_cov_0.900585_g29314_i0 PRJNA1108009 29632 244 0.900585 2.1974274 Akkermansia sp. 1872421 Bacteria Bacteria 153 1.2e-45   NR MBR5889330.1 1872421 g29314 i0 90.1 0.995901639344262 81 8 99.6 0 2 244 53 133 MBR5889330.1 hypothetical protein [Akkermansia sp.] diamond 243 153 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
30731172 30731172 PRJNA1108009_P_NODE_28054_length_246_cov_0.890173_g27736_i0 PRJNA1108009 28054 246 0.890173 2.18982558 Akkermansia sp. 1872421 Bacteria Bacteria 154 7.8e-45   NR MBR2144576.1 1872421 g27736 i0 91.4 0.98780487804878 81 7 98.8 0 244 2 96 176 MBR2144576.1 glycoside hydrolase family 95 protein [Akkermansia sp.] diamond 243 154 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
31932577 31932577 PRJNA1108009_P_NODE_30317_length_243_cov_0.905882_g29999_i0 PRJNA1108009 30317 243 0.905882 2.20129326 Akkermansia sp. 1872421 Bacteria Bacteria 167 5.26e-49   NR MBQ6941246.1 1872421 g29999 i0 100 0.987654320987654 80 0 98.8 0 241 2 195 274 MBQ6941246.1 hypothetical protein [Akkermansia sp.] diamond 240 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
32122679 32122679 PRJNA1108009_P_NODE_21338_length_277_cov_1.264706_g21020_i0 PRJNA1108009 21338 277 1.264706 3.50323562 Akkermansia sp. 1872421 Bacteria Bacteria 89.7 1.42e-18   NR MBQ8479279.1 1872421 g21020 i0 84 1.08303249097473 50 8 54.2 0 126 275 72 121 MBQ8479279.1 replicative DNA helicase [Akkermansia sp.] diamond 300 89.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
32185869 32185869 PRJNA1108009_P_NODE_24898_length_251_cov_0.865169_g24580_i0 PRJNA1108009 24898 251 0.865169 2.17157419 Akkermansia sp. 1872421 Bacteria Bacteria 79.3 4.03e-15   NR MBQ8479294.1 1872421 g24580 i0 51.8 0.99203187250996006 83 40 99.2 0 250 2 193 275 MBQ8479294.1 hypothetical protein [Akkermansia sp.] diamond 249 79.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
32470753 32470753 PRJNA1108009_P_NODE_22939_length_264_cov_1.230366_g22621_i0 PRJNA1108009 22939 264 1.230366 3.24816624 Akkermansia sp. 1872421 Bacteria Bacteria 149 1.84e-39   NR MBQ9829201.1 1872421 g22621 i0 84.1 1 88 14 100 0 1 264 76 163 MBQ9829201.1 family 20 glycosylhydrolase [Akkermansia sp.] diamond 264 149 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
32754400 32754400 PRJNA1108009_P_NODE_25600_length_250_cov_0.870056_g25282_i0 PRJNA1108009 25600 250 0.870056 2.17514 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 88.2 2.44e-20   NR MBE6415432.1 2562705 g25282 i0 93.5 0.552 46 3 55.2 0 139 2 1 46 MBE6415432.1 ribosome silencing factor [Akkermansiaceae bacterium] diamond 138 88.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
32848821 32848821 PRJNA1108009_P_NODE_25460_length_250_cov_0.870056_g25142_i0 PRJNA1108009 25460 250 0.870056 2.17514 Akkermansia sp. 1872421 Bacteria Bacteria 162 1.83e-45   NR MEE1265810.1 1872421 g25142 i0 95.2 0.996 83 4 99.6 0 1 249 363 445 MEE1265810.1 hypothetical protein [Akkermansia sp.] diamond 249 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;