RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1108009" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1108009 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2763945 2763945 PRJNA1108009_P_NODE_3_length_7144_cov_33.077358_g2_i0 PRJNA1108009 3 7144 33.077358 2363.04645552 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2474 0   NR WKU61618.1 3063761 g2 i0 63.4 0.933090705487122 2222 787 92.3 4 510 7103 1 2220 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 6666 2474 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
27447189 27447189 PRJNA1108009_P_NODE_8943_length_457_cov_1.002604_g8626_i0 PRJNA1108009 8943 457 1.002604 4.58190028 Currant latent virus 1476584 Viruses Viruses 216 2.65e-62   NR WMN13751.1 1476584 g8626 i0 81.6 0.99781181619256 152 24 97.8 3 6 452 1 151 WMN13751.1 polyprotein [Currant latent virus] diamond 456 216 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Cheravirus Cheravirus ribis
32407335 32407335 PRJNA1108009_P_NODE_18859_length_298_cov_1.026667_g18541_i0 PRJNA1108009 18859 298 1.026667 3.05946766 Currant latent virus 1476584 Viruses Viruses 191 5.7e-54   NR WMN13750.1 1476584 g18541 i0 97 0.996644295302013 99 3 99.7 0 297 1 1009 1107 WMN13750.1 polyprotein [Currant latent virus] diamond 297 191 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Cheravirus Cheravirus ribis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;