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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA1108009" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA1108009 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10416778 10416778 PRJNA1108009_P_NODE_8289_length_476_cov_2.570720_g7972_i0 PRJNA1108009 8289 476 2.57072 12.2366272 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 163 1.21e-48   NR 1PRQ_A 5755 g7972 i0 67.2 1.57563025210084 125 41 78.8 0 444 70 1 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 750 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14241531 14241531 PRJNA1108009_P_NODE_12532_length_376_cov_1.293729_g12214_i0 PRJNA1108009 12532 376 1.293729 4.86442104 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 166 1.0700000000000001e-49   NR XP_004334896.1 1257118 g12214 i0 62.2 2.0186170212766 127 45 98.9 1 375 4 25 151 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 759 166 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16789780 16789780 PRJNA1108009_P_NODE_10214_length_423_cov_0.880000_g9896_i0 PRJNA1108009 10214 423 0.88 3.7224 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 178 8.73e-50   NR XP_004335132.1 1257118 g9896 i0 72.2 4.4468085106383 126 35 89.4 0 422 45 475 600 XP_004335132.1 ABC transporter, ATPbinding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1881 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20614361 20614361 PRJNA1108009_P_NODE_4037_length_697_cov_1.214744_g3733_i0 PRJNA1108009 4037 697 1.214744 8.46676568 root 1 Root_unresolved Root_unresolved 248 7.88e-80   NR XP_004356664.1 1257118 g3733 i0 63.6 2.40172166427547 187 65 79.2 1 71 622 13 199 XP_004356664.1 rho guanine dissociation factor isoform 2, putative [Acanthamoeba castellanii str. Neff] diamond 1674 248 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23972843 23972843 PRJNA1108009_P_NODE_3339_length_762_cov_1.899855_g3053_i0 PRJNA1108009 3339 762 1.899855 14.4768951 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 382 4.800000000000001e-124   NR XP_004337289.1 1257118 g3053 i0 78.7 0.960629921259842 244 51 96.1 1 733 2 1 243 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 732 382 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27162315 27162315 PRJNA1108009_P_NODE_26862_length_248_cov_0.880000_g26544_i0 PRJNA1108009 26862 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 51.2 1.67e-5   NR XP_004339874.1 1257118 g26544 i0 40 0.786290322580645 65 39 78.6 0 7 201 30 94 XP_004339874.1 Transloconassociated protein subunit gamma, putative [Acanthamoeba castellanii str. Neff] diamond 195 51.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28425851 28425851 PRJNA1108009_P_NODE_22686_length_266_cov_1.196891_g22368_i0 PRJNA1108009 22686 266 1.196891 3.18373006 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 110 3.42e-26   NR XP_004341623.1 1257118 g22368 i0 55.8 0.969924812030075 86 38 97 0 260 3 230 315 XP_004341623.1 uncharacterized protein ACA1_269790 [Acanthamoeba castellanii str. Neff] diamond 258 110 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28899160 28899160 PRJNA1108009_P_NODE_26428_length_249_cov_0.875000_g26110_i0 PRJNA1108009 26428 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.1 1.68e-13   NR XP_004335839.1 1257118 g26110 i0 53.2 2.2289156626506 62 29 74.7 0 1 186 238 299 XP_004335839.1 exoribonuclease, putative [Acanthamoeba castellanii str. Neff] diamond 555 75.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29088870 29088870 PRJNA1108009_P_NODE_9128_length_451_cov_1.420635_g8810_i0 PRJNA1108009 9128 451 1.420635 6.40706385 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 224 8.97e-70   NR AFD36233.1 5755 g8810 i0 73.7 1.0110864745011101 152 38 99.8 1 2 451 91 242 AFD36233.1 protein kinase C4, partial [Acanthamoeba castellanii] diamond 456 224 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29688401 29688401 PRJNA1108009_P_NODE_7750_length_494_cov_1.389549_g7433_i0 PRJNA1108009 7750 494 1.389549 6.86437206 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 172 7.19e-49   NR XP_004335438.1 1257118 g7433 i0 45.2 1.0748987854251 177 82 98.4 3 493 8 130 306 XP_004335438.1 oxysterol binding protein [Acanthamoeba castellanii str. Neff] diamond 531 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30699510 30699510 PRJNA1108009_P_NODE_26734_length_248_cov_0.880000_g26416_i0 PRJNA1108009 26734 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 8.79e-28   NR XP_004345891.1 1257118 g26416 i0 64.6 4.95967741935484 82 28 99.2 1 247 2 367 447 XP_004345891.1 atpdependent rna helicase ddx10, putative [Acanthamoeba castellanii str. Neff] diamond 1230 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30952584 30952584 PRJNA1108009_P_NODE_9514_length_441_cov_1.464674_g9196_i0 PRJNA1108009 9514 441 1.464674 6.45921234 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 164 6.2299999999999996e-46   NR XP_004341586.1 1257118 g9196 i0 48.6 0.965986394557823 142 73 96.6 0 7 432 257 398 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 426 164 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32122685 32122685 PRJNA1108009_P_NODE_30538_length_243_cov_0.905882_g30220_i0 PRJNA1108009 30538 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 81.6 5.89e-16   NR XP_004351581.1 1257118 g30220 i0 50.6 4.92592592592593 79 38 97.5 1 6 242 108 185 XP_004351581.1 glycine cleavage system T protein [Acanthamoeba castellanii str. Neff] diamond 1197 81.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32344233 32344233 PRJNA1108009_P_NODE_14579_length_346_cov_1.106227_g14261_i0 PRJNA1108009 14579 346 1.106227 3.82754542 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 126 4.2e-33   NR XP_004341414.1 1257118 g14261 i0 60.9 0.797687861271676 92 36 79.8 0 276 1 4 95 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 276 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32470764 32470764 PRJNA1108009_P_NODE_31359_length_241_cov_1.327381_g31041_i0 PRJNA1108009 31359 241 1.327381 3.19898821 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.2 6.32e-10   NR XP_004338625.1 1257118 g31041 i0 50 0.672199170124481 54 27 67.2 0 222 61 43 96 XP_004338625.1 DUF614 family protein [Acanthamoeba castellanii str. Neff] diamond 162 61.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;