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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA1108009" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 14 ✖

bioproject 1

  • PRJNA1108009 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4039985 4039985 PRJNA1108009_P_NODE_31184_length_242_cov_0.911243_g30866_i0 PRJNA1108009 31184 242 0.911243 2.20520806 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 159 6.76e-46   NR WP_367242884.1 253161 g30866 i0 100 0.991735537190083 80 0 99.2 0 2 241 219 298 WP_367242884.1 acyltransferase [uncultured Methanobrevibacter sp.] diamond 240 159 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
26750799 26750799 PRJNA1108009_P_NODE_20581_length_283_cov_1.185714_g20263_i0 PRJNA1108009 20581 283 1.185714 3.35557062 Methanobacteriota archaeon 2026739 Archaea Archaea 85.5 5.72e-17   NR HDH27971.1 2026739 g20263 i0 61.3 2.00353356890459 62 24 65.7 0 1 186 437 498 HDH27971.1 calcium-transporting P-type ATPase, PMR1-type [Methanobacteriota archaeon] diamond 567 85.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26963940 26963940 PRJNA1108009_P_NODE_25442_length_250_cov_0.870056_g25124_i0 PRJNA1108009 25442 250 0.870056 2.17514 Methanocorpusculum 2192 Archaea Archaea 133 5e-38   NR HJJ94243.1 2058474 g25124 i0 100 2.664 74 0 88.8 0 3 224 67 140 HJJ94243.1 V-type ATP synthase subunit D [Methanocorpusculum sp.] diamond 666 133 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
27216791 27216791 PRJNA1108009_P_NODE_31542_length_241_cov_0.916667_g31224_i0 PRJNA1108009 31542 241 0.916667 2.20916747 Methanocorpusculum 2192 Archaea Archaea 160 1.5199999999999996e-43   NR MBO5368776.1 2058474 g31224 i0 98.8 1.99170124481328 80 1 99.6 0 1 240 939 1018 MBO5368776.1 UvrD-helicase domain-containing protein [Methanocorpusculum sp.] diamond 480 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
27636527 27636527 PRJNA1108009_P_NODE_31744_length_241_cov_0.916667_g31426_i0 PRJNA1108009 31744 241 0.916667 2.20916747 Methanocorpusculum sp. 2058474 Archaea Archaea 139 1.1099999999999999e-39   NR MBO5430811.1 2058474 g31426 i0 97.2 0.896265560165975 72 2 89.6 0 218 3 1 72 MBO5430811.1 arginine decarboxylase, pyruvoyl-dependent [Methanocorpusculum sp.] diamond 216 139 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
27731428 27731428 PRJNA1108009_P_NODE_27044_length_248_cov_0.880000_g26726_i0 PRJNA1108009 27044 248 0.88 2.1824 Methanoregulaceae archaeon 2485498 Archaea Archaea 55.1 6.89e-7   NR NTV00992.1 2485498 g26726 i0 69.2 1.1008064516129 39 11 46 1 247 134 20 58 NTV00992.1 uroporphyrinogen-III C-methyltransferase [Methanoregulaceae archaeon] diamond 273 55.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
27825933 27825933 PRJNA1108009_P_NODE_24564_length_251_cov_1.707865_g24246_i0 PRJNA1108009 24564 251 1.707865 4.28674115 Methanosphaera sp. 2666342 Archaea Archaea 135 3.69e-39   NR MEE3325253.1 2666342 g24246 i0 76.8 0.9800796812749 82 19 98 0 4 249 1 82 MEE3325253.1 hypothetical protein [Methanosphaera sp.] diamond 246 135 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
28101163 28101163 PRJNA1108009_P_NODE_31005_length_242_cov_0.911243_g30687_i0 PRJNA1108009 31005 242 0.911243 2.20520806 Methanocorpusculum 2192 Archaea Archaea 50.4 2.73e-5   NR HJJ41284.1 2058474 g30687 i0 100 1.48760330578512 20 0 24.8 0 241 182 145 164 HJJ41284.1 hypothetical protein [Methanocorpusculum sp.] diamond 360 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
28267693 28267693 PRJNA1108009_P_NODE_27446_length_247_cov_0.885057_g27128_i0 PRJNA1108009 27446 247 0.885057 2.18609079 Methanobrevibacter smithii 2173 Archaea Archaea 41.6 0.013   NR WP_400216637.1 2173 g27128 i0 81.8 0.267206477732794 22 4 26.7 0 247 182 35 56 WP_400216637.1 hypothetical protein, partial [Methanobrevibacter smithii] diamond 66 41.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
28299373 28299373 PRJNA1108009_P_NODE_28326_length_246_cov_0.890173_g28008_i0 PRJNA1108009 28326 246 0.890173 2.18982558 Methanobrevibacter sp. 66852 Archaea Archaea 91.7 2.02e-19   NR WP_405288967.1 66852 g28008 i0 58 0.98780487804878 81 34 98.8 0 2 244 246 326 WP_405288967.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 243 91.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29435787 29435787 PRJNA1108009_P_NODE_12190_length_383_cov_0.993548_g11872_i0 PRJNA1108009 12190 383 0.993548 3.80528884 Methanobrevibacter sp. 66852 Archaea Archaea 86.3 4.42e-17   NR WP_292806969.1 66852 g11872 i0 39.8 0.963446475195822 123 69 96.3 2 381 13 97 214 WP_292806969.1 WD40 repeat domain-containing protein [Methanobrevibacter sp.] diamond 369 86.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29878301 29878301 PRJNA1108009_P_NODE_27371_length_247_cov_0.885057_g27053_i0 PRJNA1108009 27371 247 0.885057 2.18609079 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 107 1.37e-26   NR MBO7205144.1 2517205 g27053 i0 81.7 0.728744939271255 60 11 72.9 0 181 2 1 60 MBO7205144.1 hypothetical protein [Candidatus Methanomethylophilaceae archaeon] diamond 180 107 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
31995987 31995987 PRJNA1108009_P_NODE_30858_length_242_cov_0.911243_g30540_i0 PRJNA1108009 30858 242 0.911243 2.20520806 Methanobrevibacter sp. 66852 Archaea Archaea 57 8.45e-8   NR MBO7731832.1 66852 g30540 i0 65.7 0.433884297520661 35 12 43.4 0 137 241 65 99 MBO7731832.1 hypothetical protein [Methanobrevibacter sp.] diamond 105 57 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32597088 32597088 PRJNA1108009_P_NODE_26100_length_249_cov_0.875000_g25782_i0 PRJNA1108009 26100 249 0.875 2.17875 Methanocorpusculum sp. 2058474 Archaea Archaea 160 9.82e-47   NR MBR4987154.1 2058474 g25782 i0 95.1 0.987951807228916 82 4 98.8 0 2 247 78 159 MBR4987154.1 ribose-phosphate diphosphokinase [Methanocorpusculum sp.] diamond 246 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;