RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1105232" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1105232 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29215287 29215287 PRJNA1105232_S_NODE_11429_length_191_cov_1.098592_g11213_i0 PRJNA1105232 11429 191 1.098592 2.09831072 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 53.5 5.88e-7   NR MES1915011.1 1215613 g11213 i0 50.9 1.82198952879581 53 22 80.1 2 3 155 52 102 MES1915011.1 hypothetical protein [Cercozoa sp. M6MM] diamond 348 53.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30321005 30321005 PRJNA1105232_S_NODE_18772_length_152_cov_2.203883_g18556_i0 PRJNA1105232 18772 152 2.203883 3.34990216 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0108   NR MES1914904.1 1215613 g18556 i0 49 1.95394736842105 51 24 96.7 2 147 1 441 491 MES1914904.1 hypothetical protein [Cercozoa sp. M6MM] diamond 297 42.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;