RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1105232" and tax_phylum = "Candidatus Iainarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Iainarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1105232 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29364389 29364389 PRJNA1105232_S_NODE_7549_length_225_cov_3.250000_g7333_i0 PRJNA1105232 7549 225 3.25 7.3125 root 1 Root_unresolved Root_unresolved 52.8 8.6e-6   NR MCX6800890.1 2026736 g7333 i0 42 7.10666666666667 50 29 66.7 0 218 69 655 704 MCX6800890.1 Kazal-type serine protease inhibitor family protein [Candidatus Iainarchaeum archaeon] diamond 1599 53.1 0.994350282485876 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;