RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1105232" and tax_phylum = "Candidatus Helarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Helarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1105232 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26687810 26687810 PRJNA1105232_S_NODE_13401_length_178_cov_2.418605_g13185_i0 PRJNA1105232 13401 178 2.418605 4.3051169 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 41.6 0.0287   NR NVM01317.1 2719382 g13185 i0 41.8 0.926966292134832 55 31 92.7 1 165 1 96 149 NVM01317.1 GTP-binding protein [Candidatus Helarchaeota archaeon] diamond 165 41.6 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon
30604739 30604739 PRJNA1105232_S_NODE_9613_length_205_cov_1.948718_g9397_i0 PRJNA1105232 9613 205 1.948718 3.9948719 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 52.4 3.49e-6   NR NVM29220.1 2719382 g9397 i0 52.3 0.64390243902439 44 21 64.4 0 146 15 124 167 NVM29220.1 GTP-binding protein [Candidatus Helarchaeota archaeon] diamond 132 52.4 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;