contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA1105232" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1487269 | 1487269 | PRJNA1105232_S_NODE_3162_length_317_cov_3.250000_g2946_i0 | PRJNA1105232 | 3162 | 317 | 3.25 | 10.3025 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 144 | 1.06e-39 | NR | NLV58462.1 | 1898207 | g2946 | i0 | 69.5 | 1.98738170347003 | 105 | 32 | 99.4 | 0 | 317 | 3 | 210 | 314 | NLV58462.1 type I glyceraldehyde-3-phosphate dehydrogenase [Clostridiales bacterium] | diamond | 630 | 144 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 27320660 | 27320660 | PRJNA1105232_S_NODE_11123_length_193_cov_1.270833_g10907_i0 | PRJNA1105232 | 11123 | 193 | 1.270833 | 2.45270769 | Niallia nealsonii | 115979 | Bacteria | Bacteria | 68.9 | 1.13e-11 | NR | WP_101177614.1 | 115979 | g10907 | i0 | 50.8 | 1.98963730569948 | 63 | 31 | 97.9 | 0 | 192 | 4 | 924 | 986 | WP_101177614.1 alpha-mannosidase [Niallia nealsonii] | diamond | 384 | 68.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Niallia | Niallia nealsonii | ||
| 27636506 | 27636506 | PRJNA1105232_S_NODE_8964_length_211_cov_1.283951_g8748_i0 | PRJNA1105232 | 8964 | 211 | 1.283951 | 2.70913661 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 43.9 | 0.00943 | NR | MBR1651450.1 | 1898203 | g8748 | i0 | 42.3 | 2.21800947867299 | 52 | 29 | 72.5 | 1 | 30 | 182 | 247 | 298 | MBR1651450.1 glycosyltransferase family 2 protein [Lachnospiraceae bacterium] | diamond | 468 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 28552169 | 28552169 | PRJNA1105232_S_NODE_15767_length_167_cov_1.322034_g15551_i0 | PRJNA1105232 | 15767 | 167 | 1.322034 | 2.20779678 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 54.7 | 4.73e-8 | NR | MDN8682973.1 | 1280 | g15551 | i0 | 58.5 | 0.952095808383233 | 53 | 21 | 93.4 | 1 | 164 | 9 | 1 | 53 | MDN8682973.1 hypothetical protein [Staphylococcus aureus] | diamond | 159 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 29025946 | 29025946 | PRJNA1105232_S_NODE_9948_length_202_cov_3.052288_g9732_i0 | PRJNA1105232 | 9948 | 202 | 3.052288 | 6.16562176 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 68.9 | 1.7e-13 | NR | HEX9060528.1 | 2044939 | g9732 | i0 | 48.4 | 1.9009900990099 | 64 | 31 | 92.1 | 1 | 188 | 3 | 5 | 68 | HEX9060528.1 VOC family protein [Clostridia bacterium] | diamond | 384 | 68.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29341466 | 29341466 | PRJNA1105232_S_NODE_9269_length_208_cov_1.635220_g9053_i0 | PRJNA1105232 | 9269 | 208 | 1.63522 | 3.4012576 | Bacillus sp. V5-8f | 2053044 | Bacteria | Bacteria | 45.4 | 5.69e-4 | NR | WP_101631345.1 | 2053044 | g9053 | i0 | 43.5 | 0.663461538461538 | 46 | 20 | 66.3 | 1 | 154 | 17 | 24 | 63 | WP_101631345.1 phospholipase [Bacillus sp. V5-8f] | diamond | 138 | 45.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. V5-8f | ||
| 30216859 | 30216859 | PRJNA1105232_S_NODE_4232_length_283_cov_1.401709_g4016_i0 | PRJNA1105232 | 4232 | 283 | 1.401709 | 3.96683647 | Bacteria | 2 | Bacteria | Bacteria | 57.8 | 3.1e-7 | NR | WP_091726713.1 | 415015 | g4016 | i0 | 65 | 2.57597173144876 | 40 | 14 | 42.4 | 0 | 279 | 160 | 460 | 499 | WP_091726713.1 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Proteiniborus ethanoligenes] | diamond | 729 | 57.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Proteiniborus | Proteiniborus ethanoligenes | |||
| 30312268 | 30312268 | PRJNA1105232_S_NODE_11932_length_187_cov_2.347826_g11716_i0 | PRJNA1105232 | 11932 | 187 | 2.347826 | 4.39043462 | Bacillaceae | 186817 | Bacteria | Bacteria | 48.9 | 1.19e-4 | NR | WP_151573940.1 | 1071718 | g11716 | i0 | 36.7 | 2.79144385026738 | 60 | 35 | 96.3 | 1 | 184 | 5 | 463 | 519 | WP_151573940.1 alkaline phosphatase [Bacillus mesophilum] | diamond | 522 | 49.3 | 0.991886409736308 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mesophilum | ||
| 31078898 | 31078898 | PRJNA1105232_S_NODE_4955_length_266_cov_1.714286_g4739_i0 | PRJNA1105232 | 4955 | 266 | 1.714286 | 4.56000076 | Tissierella praeacuta | 43131 | Bacteria | Bacteria | 92 | 2.02e-20 | NR | WP_353097328.1 | 43131 | g4739 | i0 | 53.9 | 1.99624060150376 | 89 | 40 | 99.2 | 1 | 2 | 265 | 118 | 206 | WP_353097328.1 copper homeostasis protein CutC [Tissierella praeacuta] | diamond | 531 | 92 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Tissierellaceae | Tissierella | Tissierella praeacuta | ||
| 31204687 | 31204687 | PRJNA1105232_S_NODE_9415_length_207_cov_1.145570_g9199_i0 | PRJNA1105232 | 9415 | 207 | 1.14557 | 2.3713299 | Alkaliphilus sp. | 1872455 | Bacteria | Bacteria | 84.7 | 3.54e-17 | NR | MBS3995326.1 | 1872455 | g9199 | i0 | 66.7 | 4.43478260869565 | 60 | 20 | 87 | 0 | 186 | 7 | 341 | 400 | MBS3995326.1 proline--tRNA ligase [Alkaliphilus sp.] | diamond | 918 | 84.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Natronincolaceae | Alkaliphilus | Alkaliphilus sp. | ||
| 31964172 | 31964172 | PRJNA1105232_S_NODE_11718_length_189_cov_0.771429_g11502_i0 | PRJNA1105232 | 11718 | 189 | 0.771429 | 1.45800081 | [Clostridium] innocuum | 1522 | Bacteria | Bacteria | 44.7 | 0.00379 | NR | WP_233106945.1 | 1522 | g11502 | i0 | 43.9 | 0.650793650793651 | 41 | 23 | 65.1 | 0 | 67 | 189 | 69 | 109 | WP_233106945.1 isoaspartyl peptidase/L-asparaginase [[Clostridium] innocuum] | diamond | 123 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | [Clostridium] innocuum | ||
| 32154162 | 32154162 | PRJNA1105232_S_NODE_11118_length_193_cov_1.409722_g10902_i0 | PRJNA1105232 | 11118 | 193 | 1.409722 | 2.72076346 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 121 | 8.189999999999999e-31 | NR | MBP7025639.1 | 2044939 | g10902 | i0 | 93.8 | 7.95854922279793 | 64 | 4 | 99.5 | 0 | 1 | 192 | 100 | 163 | MBP7025639.1 type II secretion system F family protein [Clostridia bacterium] | diamond | 1536 | 121 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32407329 | 32407329 | PRJNA1105232_S_NODE_17379_length_162_cov_0.920354_g17163_i0 | PRJNA1105232 | 17379 | 162 | 0.920354 | 1.49097348 | Erysipelotrichaceae bacterium | 2049044 | Bacteria | Bacteria | 48.5 | 1.06e-4 | NR | MBE6134959.1 | 2049044 | g17163 | i0 | 45.1 | 1.88888888888889 | 51 | 28 | 94.4 | 0 | 5 | 157 | 237 | 287 | MBE6134959.1 ATP synthase F1 subunit gamma [Erysipelotrichaceae bacterium] | diamond | 306 | 48.5 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;