RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1104180" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 5 ✖

bioproject 1

  • PRJNA1104180 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27257339 27257339 PRJNA1104180_P_NODE_26043_length_241_cov_2.392857_g25900_i0 PRJNA1104180 26043 241 2.392857 5.76678537 Caudoviricetes sp. 2832643 Viruses Viruses 93.2 1.75e-22   NR XOR18952.1 2832643 g25900 i0 70.4 0.883817427385892 71 21 88.4 0 213 1 3 73 XOR18952.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 213 93.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28078321 28078321 PRJNA1104180_P_NODE_22685_length_247_cov_0.885057_g22542_i0 PRJNA1104180 22685 247 0.885057 2.18609079 Caudoviricetes sp. 2832643 Viruses Viruses 86.7 1.28e-17   NR DAV82003.1 2832643 g22542 i0 51.9 0.983805668016194 81 39 98.4 0 3 245 255 335 DAV82003.1 MAG TPA: transposase [Caudoviricetes sp.] diamond 243 86.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28488920 28488920 PRJNA1104180_P_NODE_24707_length_244_cov_0.900585_g24564_i0 PRJNA1104180 24707 244 0.900585 2.1974274 Alphachrysovirus aspergilli 607716 Viruses Viruses 48.1 4.82e-4   NR YP_009508103.1 607716 g24564 i0 30 0.983606557377049 80 56 98.4 0 243 4 447 526 YP_009508103.1 hypothetical protein [Alphachrysovirus aspergilli] diamond 240 48.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus aspergilli
28836097 28836097 PRJNA1104180_P_NODE_15748_length_273_cov_1.540000_g15606_i0 PRJNA1104180 15748 273 1.54 4.2042 Staphylococcus phage 6ec 1500386 Viruses Viruses 167 3.34e-50   NR YP_009042559.1 1500386 g15606 i0 87.8 1.97802197802198 90 11 98.9 0 3 272 90 179 YP_009042559.1 endolysin [Staphylococcus phage 6ec] diamond 540 167 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sextaecvirus Sextaecvirus sextaec
30036140 30036140 PRJNA1104180_P_NODE_17051_length_266_cov_1.595855_g16909_i0 PRJNA1104180 17051 266 1.595855 4.2449743 Caudoviricetes sp. 2832643 Viruses Viruses 68.2 1.11e-12   NR XOR07379.1 2832643 g16909 i0 59.4 0.778195488721805 69 25 76.7 2 61 264 3 69 XOR07379.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 207 68.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;