RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1104180" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

bioproject 1

  • PRJNA1104180 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28078316 28078316 PRJNA1104180_P_NODE_13825_length_284_cov_1.658768_g13683_i0 PRJNA1104180 13825 284 1.658768 4.71090112 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 52.8 5.47e-6   NR MFH0797917.1 2026803 g13683 i0 33 0.992957746478873 94 47 99.3 1 2 283 10 87 MFH0797917.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 282 52.8 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31426502 31426502 PRJNA1104180_P_NODE_20536_length_250_cov_2.966102_g20393_i0 PRJNA1104180 20536 250 2.966102 7.415255 archaeon 1906665 Archaea Archaea 44.3 0.0109   NR MFH0875687.1 1906665 g20393 i0 28.6 0.924 77 55 92.4 0 239 9 207 283 MFH0875687.1 MFS transporter [archaeon] diamond 231 44.3 1 Archaea               archaeon
32154155 32154155 PRJNA1104180_P_NODE_20838_length_250_cov_0.870056_g20695_i0 PRJNA1104180 20838 250 0.870056 2.17514 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 45.4 5.67e-4   NR HYJ03180.1 2169593 g20695 i0 62.5 0.888 40 14 46.8 1 118 2 4 43 HYJ03180.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 222 45.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;