RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1103784" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18063803 18063803 PRJNA1103784_P_NODE_2595_length_335_cov_2.007634_g2540_i0 PRJNA1103784 2595 335 2.007634 6.7255739 Ignavibacteria bacterium 2053306 Bacteria Bacteria 191 4.709999999999999e-56   NR MDP3445275.1 2053306 g2540 i0 85.6 0.994029850746269 111 16 99.4 0 334 2 104 214 MDP3445275.1 Hsp70 family protein [Ignavibacteria bacterium] diamond 333 191 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
18871766 18871766 PRJNA1103784_P_NODE_315_length_836_cov_2.732634_g267_i0 PRJNA1103784 315 836 2.732634 22.84482024 Ignavibacteria bacterium 2053306 Bacteria Bacteria 375 8.8e-125   NR MDP3445275.1 2053306 g267 i0 80.3 0.911483253588517 254 50 91.1 0 836 75 218 471 MDP3445275.1 Hsp70 family protein [Ignavibacteria bacterium] diamond 762 375 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;