contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1103784" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212179 | 212179 | PRJNA1103784_P_NODE_5741_length_251_cov_0.865169_g5686_i0 | PRJNA1103784 | 5741 | 251 | 0.865169 | 2.17157419 | Rhineura floridana | 261503 | Chordata | Chordata | 97.8 | 4.019999999999999e-23 | NR | XP_061444125.1 | 261503 | g5686 | i0 | 61.7 | 4.8406374501992 | 81 | 31 | 96.8 | 0 | 251 | 9 | 108 | 188 | XP_061444125.1 ras-related protein Rab-2B isoform X1 [Rhineura floridana] | diamond | 1215 | 97.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Rhineuridae | Rhineura | Rhineura floridana | |
| 26710482 | 26710482 | PRJNA1103784_P_NODE_7781_length_241_cov_0.916667_g7726_i0 | PRJNA1103784 | 7781 | 241 | 0.916667 | 2.20916747 | Crocodylia | 1294634 | Chordata | Chordata | 77.8 | 1.63e-14 | NR | XP_059588629.1 | 8496 | g7726 | i0 | 55.9 | 5.3402489626556 | 68 | 29 | 84.6 | 1 | 35 | 238 | 402 | 468 | XP_059588629.1 fatty-acid amide hydrolase 2 [Alligator mississippiensis] | diamond | 1287 | 78.2 | 0.994884910485933 | Eukaryota | Opisthokonta | Metazoa | Chordata | Crocodylia | Alligatoridae | Alligator | Alligator mississippiensis | ||
| 26995455 | 26995455 | PRJNA1103784_P_NODE_7382_length_243_cov_0.905882_g7327_i0 | PRJNA1103784 | 7382 | 243 | 0.905882 | 2.20129326 | Petromyzontidae | 7746 | Chordata | Chordata | 64.3 | 9.61e-10 | NR | XP_061419102.1 | 7753 | g7327 | i0 | 37 | 7 | 81 | 51 | 100 | 0 | 1 | 243 | 868 | 948 | XP_061419102.1 LOW QUALITY PROTEIN: WD repeat-containing protein 3 [Lethenteron reissneri] | diamond | 1701 | 64.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lethenteron | Lethenteron reissneri | |
| 29783338 | 29783338 | PRJNA1103784_P_NODE_5731_length_251_cov_0.865169_g5676_i0 | PRJNA1103784 | 5731 | 251 | 0.865169 | 2.17157419 | Geococcyx californianus | 8947 | Chordata | Chordata | 82 | 1.35e-17 | NR | NWH68592.1 | 8947 | g5676 | i0 | 65.4 | 4.37450199203187 | 52 | 18 | 62.2 | 0 | 14 | 169 | 93 | 144 | NWH68592.1 DUS12 phosphatase [Geococcyx californianus] | diamond | 1098 | 82 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Cuculiformes | Neomorphidae | Geococcyx | Geococcyx californianus | |
| 31584845 | 31584845 | PRJNA1103784_P_NODE_3156_length_308_cov_8.361702_g3101_i0 | PRJNA1103784 | 3156 | 308 | 8.361702 | 25.75404216 | Rangifer tarandus platyrhynchus | 3082113 | Chordata | Chordata | 57 | 7.81e-7 | NR | CAI9150999.1 | 3082113 | g3101 | i0 | 96.7 | 0.292207792207792 | 30 | 1 | 29.2 | 0 | 3 | 92 | 500 | 529 | CAI9150999.1 unnamed protein product, partial [Rangifer tarandus platyrhynchus] | diamond | 90 | 57 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Rangifer | Rangifer tarandus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;