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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1103784" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 32 ✖

bioproject 1

  • PRJNA1103784 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7397982 7397982 PRJNA1103784_P_NODE_7706_length_241_cov_1.785714_g7651_i0 PRJNA1103784 7706 241 1.785714 4.30357074 Arthrobacter russicus 172040 Bacteria Bacteria 156 1.4e-43   NR WP_309797000.1 172040 g7651 i0 97.5 0.983402489626556 79 2 98.3 0 3 239 302 380 WP_309797000.1 mycothione reductase [Arthrobacter russicus] diamond 237 156 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Arthrobacter Arthrobacter russicus
21888941 21888941 PRJNA1103784_P_NODE_4798_length_266_cov_1.595855_g4743_i0 PRJNA1103784 4798 266 1.595855 4.2449743 Streptococcus pneumoniae 1313 Bacteria Bacteria 156 1.7899999999999995e-47   NR KAF8254224.1 1313 g4743 i0 94.3 0.992481203007519 88 5 99.2 0 264 1 15 102 KAF8254224.1 hypothetical protein BKP31_11290 [Streptococcus pneumoniae] diamond 264 156 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pneumoniae
26750780 26750780 PRJNA1103784_P_NODE_2161_length_362_cov_1.162630_g2106_i0 PRJNA1103784 2161 362 1.16263 4.2087206 Desulfosporosinus sp. 157907 Bacteria Bacteria 47.4 0.00311   NR MDR3540757.1 157907 g2106 i0 29.4 0.903314917127072 109 69 84.5 4 353 48 220 327 MDR3540757.1 hypothetical protein [Desulfosporosinus sp.] diamond 327 47.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Desulfitobacteriaceae Desulfosporosinus Desulfosporosinus sp.
27352404 27352404 PRJNA1103784_P_NODE_6243_length_248_cov_0.880000_g6188_i0 PRJNA1103784 6243 248 0.88 2.1824 Microbacterium sp. LCT-H2 1914306 Bacteria Bacteria 156 3.69e-45   NR WP_071330048.1 1914306 g6188 i0 85.4 0.991935483870968 82 12 99.2 0 1 246 9 90 WP_071330048.1 endonuclease/exonuclease/phosphatase family protein [Microbacterium sp. LCT-H2] diamond 246 156 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. LCT-H2
27438486 27438486 PRJNA1103784_P_NODE_1403_length_428_cov_1.718310_g1348_i0 PRJNA1103784 1403 428 1.71831 7.3543668 Nostocales 1161 Bacteria Bacteria 131 6.019999999999998e-35   NR WP_298910773.1 340711 g1348 i0 50 8.10981308411215 128 59 86.2 1 19 387 105 232 WP_298910773.1 CAP domain-containing protein [uncultured Nostoc sp.] diamond 3471 131 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc uncultured Nostoc sp.
27762926 27762926 PRJNA1103784_P_NODE_2424_length_344_cov_4.195572_g2369_i0 PRJNA1103784 2424 344 4.195572 14.43276768 Priestia flexa 86664 Bacteria Bacteria 53.5 9.15e-6   NR WP_078990296.1 86664 g2369 i0 47.4 0.497093023255814 57 26 46.2 1 314 156 1 57 WP_078990296.1 hypothetical protein [Priestia flexa] diamond 171 53.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Priestia Priestia flexa
28078314 28078314 PRJNA1103784_P_NODE_7625_length_242_cov_0.911243_g7570_i0 PRJNA1103784 7625 242 0.911243 2.20520806 Prescottella equi 43767 Bacteria Bacteria 140 3.39e-38   NR NKS38102.1 43767 g7570 i0 82.5 1.98347107438017 80 14 99.2 0 2 241 235 314 NKS38102.1 hypothetical protein [Prescottella equi] diamond 480 140 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Nocardiaceae Prescottella Prescottella equi
28425834 28425834 PRJNA1103784_P_NODE_4686_length_268_cov_1.548718_g4631_i0 PRJNA1103784 4686 268 1.548718 4.15056424 Corynebacterium suicordis 203264 Bacteria Bacteria 109 1.5999999999999998e-25   NR WP_194556289.1 203264 g4631 i0 100 0.559701492537313 50 0 56 0 1 150 518 567 WP_194556289.1 DEAD/DEAH box helicase [Corynebacterium suicordis] diamond 150 109 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium suicordis
28425835 28425835 PRJNA1103784_P_NODE_5906_length_250_cov_0.870056_g5851_i0 PRJNA1103784 5906 250 0.870056 2.17514 Pseudanabaena biceps 927669 Bacteria Bacteria 45.4 0.00443   NR NUN63810.1 927669 g5851 i0 36.4 1.584 66 37 79.2 1 248 51 610 670 NUN63810.1 VacB/RNase II family 3'-5' exoribonuclease [Pseudanabaena biceps] diamond 396 45.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pseudanabaenales Pseudanabaenaceae Pseudanabaena Pseudanabaena biceps
28741463 28741463 PRJNA1103784_P_NODE_587_length_622_cov_1.675774_g533_i0 PRJNA1103784 587 622 1.675774 10.42331428 Paenibacillus hamazuiensis 2936508 Bacteria Bacteria 65.5 1.49e-8   NR WP_248928521.1 2936508 g533 i0 26.2 0.882636655948553 183 126 85.9 5 38 571 233 411 WP_248928521.1 hypothetical protein [Paenibacillus hamazuiensis] diamond 549 65.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus hamazuiensis
29174979 29174979 PRJNA1103784_P_NODE_7549_length_242_cov_0.911243_g7494_i0 PRJNA1103784 7549 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 141 5.85e-42   NR MCT6839605.1 2478472 g7494 i0 98.7 1.97107438016529 79 1 97.9 0 2 238 9 87 MCT6839605.1 cation:dicarboxylase symporter family transporter [Bifidobacteriales bacterium] diamond 477 141 1 Bacteria   Bacillati Actinomycetota Actinomycetes Bifidobacteriales     Bifidobacteriales bacterium
29246581 29246581 PRJNA1103784_P_NODE_6229_length_248_cov_0.880000_g6174_i0 PRJNA1103784 6229 248 0.88 2.1824 Kroppenstedtia eburnea 714067 Bacteria Bacteria 47.4 7.61e-4   NR WP_380134752.1 714067 g6174 i0 36 1.20967741935484 100 46 99.2 3 248 3 38 137 WP_380134752.1 glycerophosphodiester phosphodiesterase [Kroppenstedtia eburnea] diamond 300 47.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Thermoactinomycetaceae Kroppenstedtia Kroppenstedtia eburnea
29278045 29278045 PRJNA1103784_P_NODE_4309_length_276_cov_1.137931_g4254_i0 PRJNA1103784 4309 276 1.137931 3.14068956 Bacillus mycoides 1405 Bacteria Bacteria 52 1.28e-5   NR WP_235702224.1 1405 g4254 i0 39.7 2.3804347826087 73 41 79.3 1 16 234 95 164 WP_235702224.1 ankyrin repeat domain-containing protein [Bacillus mycoides] diamond 657 52 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus mycoides
29372971 29372971 PRJNA1103784_P_NODE_7229_length_243_cov_3.158824_g7174_i0 PRJNA1103784 7229 243 3.158824 7.67594232 Bellilinea sp. 2838785 Bacteria Bacteria 82.8 2.93e-16   NR WP_322792535.1 2838785 g7174 i0 48.1 1.91358024691358 79 40 97.5 1 3 239 477 554 WP_322792535.1 NBR1-Ig-like domain-containing protein [Bellilinea sp.] diamond 465 82.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Bellilinea Bellilinea sp.
29427136 29427136 PRJNA1103784_P_NODE_6349_length_248_cov_0.880000_g6294_i0 PRJNA1103784 6349 248 0.88 2.1824 Rhodococcus 1827 Bacteria Bacteria 58.2 1.47e-7   NR WP_301850652.1 103816 g6294 i0 39.5 2.98790322580645 81 48 98 1 245 3 587 666 WP_301850652.1 ATP-binding protein [Rhodococcus pyridinivorans] diamond 741 58.5 0.994871794871795 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Nocardiaceae Rhodococcus Rhodococcus pyridinivorans
29616501 29616501 PRJNA1103784_P_NODE_7810_length_241_cov_0.916667_g7755_i0 PRJNA1103784 7810 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 53.5 5.61e-6   NR MBI2691692.1 1909295 g7755 i0 42.4 1.56846473029046 59 34 73.4 0 43 219 301 359 MBI2691692.1 cytochrome P450 [Solirubrobacterales bacterium] diamond 378 53.9 0.992578849721707 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales     Solirubrobacterales bacterium
29719984 29719984 PRJNA1103784_P_NODE_870_length_528_cov_2.496703_g815_i0 PRJNA1103784 870 528 2.496703 13.18259184 Faecalibacterium prausnitzii 853 Bacteria Bacteria 50.4 0.0011   NR MBS6135079.1 853 g815 i0 60 0.227272727272727 40 15 22.2 1 174 58 70 109 MBS6135079.1 two-component sensor histidine kinase [Faecalibacterium prausnitzii] diamond 120 50.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Faecalibacterium Faecalibacterium prausnitzii
30185272 30185272 PRJNA1103784_P_NODE_5532_length_252_cov_2.106145_g5477_i0 PRJNA1103784 5532 252 2.106145 5.3074854 Rhodococcus 1827 Bacteria Bacteria 169 2.9799999999999998e-52   NR MCW0191935.1 1831 g5477 i0 100 3.95238095238095 83 0 98.8 0 2 250 31 113 MCW0191935.1 hypothetical protein [Rhodococcus sp. (in: high G+C Gram-positive bacteria)] diamond 996 169 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Nocardiaceae Rhodococcus Rhodococcus sp. (in: high G+C Gram-positive bacteria)
30257605 30257605 PRJNA1103784_P_NODE_7512_length_242_cov_1.337278_g7457_i0 PRJNA1103784 7512 242 1.337278 3.23621276 Arthrobacter russicus 172040 Bacteria Bacteria 129 2.39e-34   NR WP_296363163.1 172040 g7457 i0 100 0.818181818181818 66 0 81.8 0 44 241 1 66 WP_296363163.1 carbohydrate ABC transporter permease [Arthrobacter russicus] diamond 198 129 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Arthrobacter Arthrobacter russicus
30785654 30785654 PRJNA1103784_P_NODE_334_length_817_cov_1.963710_g285_i0 PRJNA1103784 334 817 1.96371 16.0435107 Bacillati 1783272 Bacteria Bacteria 48.9 0.0047   NR HLZ57354.1 2692419 g285 i0 24.3 0.899632802937577 144 92 48.5 4 149 544 39 177 HLZ57354.1 hypothetical protein [Ktedonosporobacter sp.] diamond 735 48.9 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonosporobacteraceae Ktedonosporobacter Ktedonosporobacter sp.
30857489 30857489 PRJNA1103784_P_NODE_7974_length_235_cov_4.308642_g7919_i0 PRJNA1103784 7974 235 4.308642 10.1253087 Candidatus Desulfosporosinus infrequens 2043169 Bacteria Bacteria 42.4 0.00533   NR SPF49774.1 2043169 g7919 i0 60.7 0.357446808510638 28 11 35.7 0 142 225 31 58 SPF49774.1 exported hypothetical protein [Candidatus Desulfosporosinus infrequens] diamond 84 42.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Desulfitobacteriaceae Desulfosporosinus Candidatus Desulfosporosinus infrequens
30880420 30880420 PRJNA1103784_P_NODE_1234_length_455_cov_1.801047_g1179_i0 PRJNA1103784 1234 455 1.801047 8.19476385 Gloeocapsa 102231 Bacteria Bacteria 110 6.57e-28   NR MBW4636863.1 2839657 g1179 i0 40.2 1.64175824175824 117 70 77.1 0 451 101 18 134 MBW4636863.1 hypothetical protein [Gloeocapsa sp. UFS-A4-WI-NPMV-4B04] diamond 747 110 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Gloeocapsa Gloeocapsa sp. UFS-A4-WI-NPMV-4B04
31047440 31047440 PRJNA1103784_P_NODE_5735_length_251_cov_0.865169_g5680_i0 PRJNA1103784 5735 251 0.865169 2.17157419 Candidatus Sericytochromatia bacterium 2762020 Bacteria Bacteria 141 5.189999999999999e-37   NR MFN8575644.1 2762020 g5680 i0 88 2.97609561752988 83 10 99.2 0 1 249 69 151 MFN8575644.1 polyribonucleotide nucleotidyltransferase [Candidatus Sericytochromatia bacterium] diamond 747 141 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati   Candidatus Sericytochromatia       Candidatus Sericytochromatia bacterium
31299992 31299992 PRJNA1103784_P_NODE_7355_length_243_cov_0.905882_g7300_i0 PRJNA1103784 7355 243 0.905882 2.20129326 Lentilactobacillus buchneri 1581 Bacteria Bacteria 43.5 0.0193   NR WP_136838392.1 1581 g7300 i0 42.9 0.604938271604938 49 25 60.5 1 152 6 220 265 WP_136838392.1 McrB family protein [Lentilactobacillus buchneri] diamond 147 43.5 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Lentilactobacillus buchneri
31363433 31363433 PRJNA1103784_P_NODE_7776_length_241_cov_0.916667_g7721_i0 PRJNA1103784 7776 241 0.916667 2.20916747 Lawsonella sp. 2041415 Bacteria Bacteria 62 5.68e-9   NR WP_320616745.1 2041415 g7721 i0 100 0.37344398340249 30 0 37.3 0 150 239 214 243 WP_320616745.1 transcription termination factor Rho [Lawsonella sp.] diamond 90 62 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella Lawsonella sp.
31869277 31869277 PRJNA1103784_P_NODE_957_length_504_cov_4.336427_g902_i0 PRJNA1103784 957 504 4.336427 21.85559208 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 77.8 7.53e-14   NR MEK7432811.1 2847862 g902 i0 66.1 0.333333333333333 56 19 33.3 0 168 1 100 155 MEK7432811.1 hypothetical protein [Cyanobacteriota bacterium] diamond 168 77.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium
32059147 32059147 PRJNA1103784_P_NODE_5438_length_254_cov_1.618785_g5383_i0 PRJNA1103784 5438 254 1.618785 4.1117139 Lawsonella clevelandensis 1528099 Bacteria Bacteria 175 2.7499999999999993e-52   NR WP_373567037.1 1528099 g5383 i0 100 0.992125984251969 84 0 99.2 0 254 3 183 266 WP_373567037.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Lawsonella clevelandensis] diamond 252 175 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella Lawsonella clevelandensis
32154151 32154151 PRJNA1103784_P_NODE_5198_length_259_cov_1.365591_g5143_i0 PRJNA1103784 5198 259 1.365591 3.53688069 Renibacterium sp. 1914289 Bacteria Bacteria 179 2.58e-56   NR MBQ1445421.1 1914289 g5143 i0 96.5 0.996138996138996 86 3 99.6 0 1 258 29 114 MBQ1445421.1 hypothetical protein [Renibacterium sp.] diamond 258 179 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Renibacterium Renibacterium sp.
32185853 32185853 PRJNA1103784_P_NODE_7258_length_243_cov_1.758824_g7203_i0 PRJNA1103784 7258 243 1.758824 4.27394232 Luteipulveratus mongoliensis 571913 Bacteria Bacteria 61.6 3.12e-9   NR WP_169787611.1 571913 g7203 i0 46.8 0.950617283950617 77 39 95.1 2 6 236 140 214 WP_169787611.1 TetR/AcrR family transcriptional regulator [Luteipulveratus mongoliensis] diamond 231 61.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Dermacoccaceae Luteipulveratus Luteipulveratus mongoliensis
32650952 32650952 PRJNA1103784_P_NODE_1000_length_495_cov_2.196682_g945_i0 PRJNA1103784 1000 495 2.196682 10.8735759 Actinomycetota 201174 Bacteria Bacteria 103 2.78e-24   NR HEY7821804.1 2080302 g945 i0 50.5 1.88484848484848 101 46 61.2 1 319 17 6 102 HEY7821804.1 peptidoglycan-binding domain-containing protein [Acidimicrobiia bacterium] diamond 933 103 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia       Acidimicrobiia bacterium
32691280 32691280 PRJNA1103784_P_NODE_2720_length_328_cov_1.007843_g2665_i0 PRJNA1103784 2720 328 1.007843 3.30572504 Streptomyces olivoreticuli 68246 Bacteria Bacteria 45.1 0.0142   NR WP_116209566.1 68246 g2665 i0 36.5 0.576219512195122 63 40 57.6 0 191 3 227 289 WP_116209566.1 cytochrome P450 [Streptomyces olivoreticuli] diamond 189 45.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces olivoreticuli
32817326 32817326 PRJNA1103784_P_NODE_4040_length_281_cov_2.649038_g3985_i0 PRJNA1103784 4040 281 2.649038 7.44379678 Nakamurella sp. 1869182 Bacteria Bacteria 42.7 0.0485   NR MEO5834577.1 1869182 g3985 i0 37.2 0.918149466192171 86 39 86.5 2 267 25 11 86 MEO5834577.1 LysM peptidoglycan-binding domain-containing protein [Nakamurella sp.] diamond 258 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Nakamurellales Nakamurellaceae Nakamurella Nakamurella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;