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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1103784" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA1103784 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6590249 6590249 PRJNA1103784_P_NODE_6386_length_247_cov_2.597701_g6331_i0 PRJNA1103784 6386 247 2.597701 6.41632147 Flavobacterium sp. 239 Bacteria Bacteria 148 3.54e-42   NR WP_374542109.1 239 g6331 i0 98.8 0.995951417004049 82 1 99.6 0 2 247 40 121 WP_374542109.1 OmpH family outer membrane protein [Flavobacterium sp.] diamond 246 148 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
18063803 18063803 PRJNA1103784_P_NODE_2595_length_335_cov_2.007634_g2540_i0 PRJNA1103784 2595 335 2.007634 6.7255739 Ignavibacteria bacterium 2053306 Bacteria Bacteria 191 4.709999999999999e-56   NR MDP3445275.1 2053306 g2540 i0 85.6 0.994029850746269 111 16 99.4 0 334 2 104 214 MDP3445275.1 Hsp70 family protein [Ignavibacteria bacterium] diamond 333 191 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
18871766 18871766 PRJNA1103784_P_NODE_315_length_836_cov_2.732634_g267_i0 PRJNA1103784 315 836 2.732634 22.84482024 Ignavibacteria bacterium 2053306 Bacteria Bacteria 375 8.8e-125   NR MDP3445275.1 2053306 g267 i0 80.3 0.911483253588517 254 50 91.1 0 836 75 218 471 MDP3445275.1 Hsp70 family protein [Ignavibacteria bacterium] diamond 762 375 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27193997 27193997 PRJNA1103784_P_NODE_4302_length_276_cov_1.315271_g4247_i0 PRJNA1103784 4302 276 1.315271 3.63014796 Balneolaceae bacterium 2053516 Bacteria Bacteria 45.4 0.00585   NR MEX0905646.1 2053516 g4247 i0 34.6 1.66304347826087 78 46 82.6 3 250 23 156 230 MEX0905646.1 FAD/NAD(P)-binding oxidoreductase [Balneolaceae bacterium] diamond 459 45.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
29269280 29269280 PRJNA1103784_P_NODE_3609_length_291_cov_1.747706_g3554_i0 PRJNA1103784 3609 291 1.747706 5.08582446 Bacteroidota 976 Bacteria Bacteria 67 2.02e-11   NR WP_166552178.1 2683263 g3554 i0 100 1.05154639175258 51 0 52.6 0 249 97 1 51 WP_166552178.1 hypothetical protein [Cellulophaga sp. BC115SP] diamond 306 67 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
30130527 30130527 PRJNA1103784_P_NODE_1892_length_380_cov_1.446254_g1837_i0 PRJNA1103784 1892 380 1.446254 5.4957652 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 120 5.51e-32   NR HPI20161.1 2447898 g1837 i0 52.9 2.4 102 48 80.5 0 4 309 61 162 HPI20161.1 glutathione peroxidase [Candidatus Kapaibacterium sp.] diamond 912 120 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32628247 32628247 PRJNA1103784_P_NODE_7320_length_243_cov_0.905882_g7265_i0 PRJNA1103784 7320 243 0.905882 2.20129326 Prevotella disiens 28130 Bacteria Bacteria 149 3.1e-42   NR WP_004358443.1 28130 g7265 i0 100 0.987654320987654 80 0 98.8 0 2 241 114 193 WP_004358443.1 polyprenyl synthetase family protein [Prevotella disiens] diamond 240 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella disiens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;