RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1101946" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1101946 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28520495 28520495 PRJNA1101946_S_NODE_14167_length_214_cov_2.030303_g14068_i0 PRJNA1101946 14167 214 2.030303 4.34484842 Chilo suppressalis 168631 Arthropoda Arthropoda 43.1 0.019   NR RVE49807.1 168631 g14068 i0 50 1.66822429906542 34 13 47.7 1 7 108 114 143 RVE49807.1 hypothetical protein evm_005537 [Chilo suppressalis] diamond 357 43.5 0.990804597701149 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Crambidae Chilo Chilo suppressalis
29120540 29120540 PRJNA1101946_S_NODE_20929_length_176_cov_2.669291_g20830_i0 PRJNA1101946 20929 176 2.669291 4.69795216 Megalopta genalis 115081 Arthropoda Arthropoda 41.6 0.0398   NR XP_033337768.1 115081 g20830 i0 48.8 0.698863636363636 41 19 66.5 1 55 171 56 96 XP_033337768.1 xanthine dehydrogenase 1-like [Megalopta genalis] diamond 123 41.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Halictidae Megalopta Megalopta genalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;