RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1101048" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1101048 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27312065 27312065 PRJNA1101048_P_NODE_6083_length_267_cov_0.907216_g6027_i0 PRJNA1101048 6083 267 0.907216 2.42226672 Kockovaella 4998 Fungi Fungi 45.1 0.00733   NR XP_021872601.1 4999 g6027 i0 32.3 1.46067415730337 65 44 73 0 223 29 49 113 XP_021872601.1 hypothetical protein BD324DRAFT_376200 [Kockovaella imperatae] diamond 390 45.4 0.993392070484582 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae
29372935 29372935 PRJNA1101048_P_NODE_8329_length_247_cov_0.890805_g8273_i0 PRJNA1101048 8329 247 0.890805 2.20028835 Schizophyllum commune Tattone D 1314663 Fungi Fungi 40.8 0.0308   NR KAI5832722.1 1314663 g8273 i0 36 0.607287449392713 50 31 59.5 1 204 58 22 71 KAI5832722.1 hypothetical protein K523DRAFT_325322 [Schizophyllum commune Tattone D] diamond 150 40.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Schizophyllaceae Schizophyllum Schizophyllum commune
32502375 32502375 PRJNA1101048_P_NODE_7719_length_250_cov_0.870056_g7663_i0 PRJNA1101048 7719 250 0.870056 2.17514 Mycena chlorophos 658473 Fungi Fungi 45.4 0.00444   NR KAF7298031.1 658473 g7663 i0 36.9 0.78 65 38 78 1 12 206 539 600 KAF7298031.1 Methyltransf-2 domain-containing protein [Mycena chlorophos] diamond 195 45.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena chlorophos

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;