RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1101048" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1101048 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27731374 27731374 PRJNA1101048_P_NODE_7444_length_251_cov_0.876404_g7388_i0 PRJNA1101048 7444 251 0.876404 2.19977404 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.3 0.0113   NR MDM7996132.1 1978231 g7388 i0 41.7 0.717131474103586 60 34 70.5 1 2 178 328 387 MDM7996132.1 MFS transporter [Acidobacteriota bacterium] diamond 180 44.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30415541 30415541 PRJNA1101048_P_NODE_9333_length_242_cov_0.923077_g9277_i0 PRJNA1101048 9333 242 0.923077 2.23384634 Bryobacterales bacterium 2026791 Bacteria Bacteria 42.7 0.0245   NR MCC6538251.1 2026791 g9277 i0 42.6 0.756198347107438 61 28 66.9 3 68 229 36 96 MCC6538251.1 hypothetical protein [Bryobacterales bacterium] diamond 183 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;