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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA1098727" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1098727 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211082 211082 PRJNA1098727_P_NODE_11861_length_175_cov_1.595238_g11620_i0 PRJNA1098727 11861 175 1.595238 2.7916665 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 100 1.1e-23   NR MCX6858354.1 2026799 g11620 i0 90.7 0.925714285714286 54 5 92.6 0 170 9 244 297 MCX6858354.1 site-specific integrase [Verrucomicrobiota bacterium] diamond 162 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
11689822 11689822 PRJNA1098727_P_NODE_13830_length_166_cov_1.641026_g13589_i0 PRJNA1098727 13830 166 1.641026 2.72410316 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 103 6.77e-24   NR MBJ7390783.1 2201154 g13589 i0 89.1 4.95180722891566 55 6 99.4 0 165 1 548 602 MBJ7390783.1 polyphosphate kinase 1 [Chthoniobacterales bacterium] diamond 822 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
16788209 16788209 PRJNA1098727_P_NODE_13234_length_168_cov_0.873950_g12993_i0 PRJNA1098727 13234 168 0.87395 1.468236 Prosthecobacter 48463 Bacteria Bacteria 106 5.74e-25   NR WP_395717326.1 1965333 g12993 i0 98.2 12 56 1 100 0 168 1 346 401 WP_395717326.1 cbb3-type cytochrome c oxidase subunit I [Prosthecobacter sp.] diamond 2016 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
27415562 27415562 PRJNA1098727_P_NODE_11483_length_178_cov_1.604651_g11242_i0 PRJNA1098727 11483 178 1.604651 2.85627878 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 53.9 1.98e-7   NR MAD25766.1 2026801 g11242 i0 65.6 1.07865168539326 32 11 53.9 0 97 2 2 33 MAD25766.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 192 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28322233 28322233 PRJNA1098727_P_NODE_15386_length_163_cov_0.912281_g15145_i0 PRJNA1098727 15386 163 0.912281 1.48701803 Prosthecobacter 48463 Bacteria Bacteria 104 9.05e-25   NR WP_184340206.1 48466 g15145 i0 94.4 4.96932515337423 54 3 99.4 0 162 1 279 332 WP_184340206.1 homoserine dehydrogenase [Prosthecobacter vanneervenii] diamond 810 105 0.990476190476191 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter vanneervenii
28646800 28646800 PRJNA1098727_P_NODE_14727_length_164_cov_0.904348_g14486_i0 PRJNA1098727 14727 164 0.904348 1.48313072 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 63.9 3.62e-10   NR MEY2543526.1 2026799 g14486 i0 57.1 3.20121951219512 42 18 76.8 0 147 22 5 46 MEY2543526.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 525 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28741417 28741417 PRJNA1098727_P_NODE_13207_length_168_cov_0.873950_g12966_i0 PRJNA1098727 13207 168 0.87395 1.468236 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 92 4.8e-20   NR MEX1010352.1 2201154 g12966 i0 83.6 3.92857142857143 55 9 98.2 0 165 1 325 379 MEX1010352.1 NAD(P)/FAD-dependent oxidoreductase [Chthoniobacterales bacterium] diamond 660 92 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29120530 29120530 PRJNA1098727_P_NODE_14569_length_165_cov_0.870690_g14328_i0 PRJNA1098727 14569 165 0.87069 1.4366385 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 72 4.85e-13   NR GDX11140.1 2026799 g14328 i0 58.5 0.963636363636364 53 22 96.4 0 165 7 180 232 GDX11140.1 hypothetical protein LBMAG57_29120 [Verrucomicrobiota bacterium] diamond 159 72 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29467280 29467280 PRJNA1098727_P_NODE_14030_length_166_cov_0.888889_g13789_i0 PRJNA1098727 14030 166 0.888889 1.47555574 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 106 5.66e-25   NR MCU0776801.1 2562705 g13789 i0 87.3 0.993975903614458 55 7 99.4 0 2 166 489 543 MCU0776801.1 hypothetical protein [Akkermansiaceae bacterium] diamond 165 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
29719947 29719947 PRJNA1098727_P_NODE_15270_length_163_cov_0.912281_g15029_i0 PRJNA1098727 15270 163 0.912281 1.48701803 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 95.1 1.08e-22   NR MFM8810043.1 2201154 g15029 i0 88.7 3.90184049079755 53 6 97.5 0 1 159 2 54 MFM8810043.1 exosortase/archaeosortase family protein [Chthoniobacterales bacterium] diamond 636 95.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30280567 30280567 PRJNA1098727_P_NODE_15372_length_163_cov_0.912281_g15131_i0 PRJNA1098727 15372 163 0.912281 1.48701803 Prosthecobacter 48463 Bacteria Bacteria 100 5.77e-23   NR WP_322278807.1 1965333 g15131 i0 96.2 1.95092024539877 53 2 97.5 0 160 2 1259 1311 WP_322278807.1 PVC-type heme-binding CxxCH protein [Prosthecobacter sp.] diamond 318 101 0.99009900990099 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30731114 30731114 PRJNA1098727_P_NODE_13034_length_168_cov_1.588235_g12793_i0 PRJNA1098727 13034 168 1.588235 2.6682348 Prosthecobacter sp. 1965333 Bacteria Bacteria 107 2.14e-26   NR MEZ5385044.1 1965333 g12793 i0 94.5 0.982142857142857 55 3 98.2 0 4 168 206 260 MEZ5385044.1 polysaccharide deacetylase family protein [Prosthecobacter sp.] diamond 165 107 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
31711178 31711178 PRJNA1098727_P_NODE_11977_length_174_cov_1.608000_g11736_i0 PRJNA1098727 11977 174 1.608 2.79792 Ereboglobus luteus 1796921 Bacteria Bacteria 68.6 1.13e-11   NR WP_108825712.1 1796921 g11736 i0 63.2 9.48275862068965 57 21 98.3 0 173 3 73 129 WP_108825712.1 M48 family metallopeptidase [Ereboglobus luteus] diamond 1650 68.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Ereboglobus Ereboglobus luteus
31837484 31837484 PRJNA1098727_P_NODE_15557_length_162_cov_1.592920_g15316_i0 PRJNA1098727 15557 162 1.59292 2.5805304 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 61.6 4.94e-10   NR MCX6966096.1 2026799 g15316 i0 60.4 1.77777777777778 48 19 88.9 0 161 18 107 154 MCX6966096.1 helicase-related protein [Verrucomicrobiota bacterium] diamond 288 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31932511 31932511 PRJNA1098727_P_NODE_14477_length_165_cov_0.896552_g14236_i0 PRJNA1098727 14477 165 0.896552 1.4793108 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 86.3 6.11e-18   NR MBJ7391054.1 2201154 g14236 i0 79.6 0.981818181818182 54 11 98.2 0 162 1 753 806 MBJ7391054.1 excinuclease ABC subunit UvrA [Chthoniobacterales bacterium] diamond 162 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32344170 32344170 PRJNA1098727_P_NODE_13139_length_168_cov_0.873950_g12898_i0 PRJNA1098727 13139 168 0.87395 1.468236 Prosthecobacter sp. 1965333 Bacteria Bacteria 79.7 2.67e-16   NR MEZ5384735.1 1965333 g12898 i0 92.3 0.696428571428571 39 3 69.6 0 3 119 214 252 MEZ5384735.1 glycosyltransferase family 2 protein [Prosthecobacter sp.] diamond 117 79.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
32628204 32628204 PRJNA1098727_P_NODE_5600_length_268_cov_0.940639_g5359_i0 PRJNA1098727 5600 268 0.940639 2.52091252 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 154 4.76e-44   NR MBJ7390203.1 2201154 g5359 i0 86.6 4.58955223880597 82 11 91.8 0 246 1 1 82 MBJ7390203.1 ring-cleaving dioxygenase [Chthoniobacterales bacterium] diamond 1230 154 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32650937 32650937 PRJNA1098727_P_NODE_15160_length_163_cov_0.912281_g14919_i0 PRJNA1098727 15160 163 0.912281 1.48701803 Bacteria 2 Bacteria Bacteria 80.9 1.17e-16   NR NDH00700.1 2026771 g14919 i0 60.8 1.87730061349693 51 20 93.9 0 160 8 148 198 NDH00700.1 ligase-associated DNA damage response exonuclease [Opitutia bacterium] diamond 306 81.3 0.995079950799508 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
32659610 32659610 PRJNA1098727_P_NODE_14540_length_165_cov_0.896552_g14299_i0 PRJNA1098727 14540 165 0.896552 1.4793108 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 85.5 1.09e-17   NR MBK8037429.1 2026800 g14299 i0 75.5 4.81818181818182 53 13 96.4 0 164 6 22 74 MBK8037429.1 DUF1553 domain-containing protein [Verrucomicrobiaceae bacterium] diamond 795 85.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;