RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1098727" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1098727 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26846399 26846399 PRJNA1098727_P_NODE_13121_length_168_cov_0.873950_g12880_i0 PRJNA1098727 13121 168 0.87395 1.468236 Cyanobium sp. 49614_E6 2904989 Bacteria Bacteria 42.7 0.00285   NR MCE2839606.1 2904989 g12880 i0 70.8 0.428571428571429 24 7 42.9 0 20 91 23 46 MCE2839606.1 hypothetical protein [Cyanobium sp. 49614_E6] diamond 72 42.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Cyanobium Cyanobium sp. 49614_E6
28583703 28583703 PRJNA1098727_P_NODE_6647_length_242_cov_1.606218_g6406_i0 PRJNA1098727 6647 242 1.606218 3.88704756 Hydrococcus sp. Prado102 2929567 Bacteria Bacteria 41.6 0.0345   NR MCU0537081.1 2929567 g6406 i0 41.3 0.570247933884298 46 27 57 0 18 155 19 64 MCU0537081.1 hypothetical protein [Hydrococcus sp. Prado102] diamond 138 41.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pleurocapsales Hydrococcaceae Hydrococcus Hydrococcus sp. Prado102

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;